5ICW | pdb_00005icw

Crystal structure of human NatF (hNaa60) homodimer bound to Coenzyme A

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d5icwd_	Alpha and beta proteins (a+b)	Acyl-CoA N-acyltransferases (Nat)	Acyl-CoA N-acyltransferases (Nat)	automated matches	automated matches	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
C	d5icwc_	Alpha and beta proteins (a+b)	Acyl-CoA N-acyltransferases (Nat)	Acyl-CoA N-acyltransferases (Nat)	automated matches	automated matches	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
B	d5icwb_	Alpha and beta proteins (a+b)	Acyl-CoA N-acyltransferases (Nat)	Acyl-CoA N-acyltransferases (Nat)	automated matches	automated matches	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A	d5icwa_	Alpha and beta proteins (a+b)	Acyl-CoA N-acyltransferases (Nat)	Acyl-CoA N-acyltransferases (Nat)	automated matches	automated matches	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D		e5icwD1	A: Alpha-beta plaits	X: Rossmann-related	H: FAD/NAD(P)-binding domain	T: Ribosomal_L24e	F:	ECOD (20:10:01)
C		e5icwC1	A: Alpha-beta plaits	X: Rossmann-related	H: FAD/NAD(P)-binding domain	T: Ribosomal_L24e	F:	ECOD (20:10:01)
B		e5icwB1	A: Alpha-beta plaits	X: Rossmann-related	H: FAD/NAD(P)-binding domain	T: Ribosomal_L24e	F:	ECOD (20:10:01)
A		e5icwA1	A: Alpha-beta plaits	X: Rossmann-related	H: FAD/NAD(P)-binding domain	T: Ribosomal_L24e	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.40.630.30	Alpha Beta	3-Layer(aba) Sandwich	Aminopeptidase	Gcn5-related N-acetyltransferase (GNAT)	CATH (utative)
C	3.40.630.30	Alpha Beta	3-Layer(aba) Sandwich	Aminopeptidase	Gcn5-related N-acetyltransferase (GNAT)	CATH (utative)
B	3.40.630.30	Alpha Beta	3-Layer(aba) Sandwich	Aminopeptidase	Gcn5-related N-acetyltransferase (GNAT)	CATH (4.3.0)
A	3.40.630.30	Alpha Beta	3-Layer(aba) Sandwich	Aminopeptidase	Gcn5-related N-acetyltransferase (GNAT)	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF00583	Acetyltransferase (GNAT) family (Acetyltransf_1)	Acetyltransferase (GNAT) family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	N-alpha-acetyltransferase 60	protein N-acetyltransferase activity catalytic activity, acting on a protein acyltransferase activity N-acetyltransferase activity protein N-terminal-methionine acetyltransferase activity transferase activity protein N-acyltransferase activity protein-N-terminal amino-acid acetyltransferase activity acetyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups catalytic activity N-acyltransferase activity identical protein binding protein binding protein N-acetyltransferase activity catalytic activity, acting on a protein acyltransferase activity N-acetyltransferase activity protein N-terminal-methionine acetyltransferase activity transferase activity protein N-acyltransferase activity protein-N-terminal amino-acid acetyltransferase activity acetyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups catalytic activity N-acyltransferase activity identical protein binding protein binding binding protein homodimerization activity protein dimerization activity protein-lysine-acetyltransferase activity histone acetyltransferase activity histone modifying activity histone H4 acetyltransferase activity	primary metabolic process gene expression macromolecule biosynthetic process protein acylation protein maturation protein acetylation biosynthetic process N-terminal protein amino acid modification macromolecule modification N-terminal protein amino acid acetylation metabolic process cellular process protein metabolic process macromolecule metabolic process primary metabolic process gene expression macromolecule biosynthetic process protein acylation protein maturation protein acetylation biosynthetic process N-terminal protein amino acid modification macromolecule modification N-terminal protein amino acid acetylation metabolic process cellular process protein metabolic process macromolecule metabolic process protein modification process protein-containing complex organization protein-DNA complex assembly cellular component organization protein-DNA complex organization cellular component biogenesis cellular component assembly chromatin organization protein-containing complex assembly chromatin remodeling cellular component organization or biogenesis nucleosome assembly nucleosome organization peptidyl-methionine modification peptidyl-amino acid modification N-terminal peptidyl-methionine acetylation cell cycle chromosome segregation cell cycle process cell population proliferation	membrane-bounded organelle Golgi membrane intracellular anatomical structure Golgi apparatus membrane intracellular membrane-bounded organelle endomembrane system intracellular organelle bounding membrane of organelle cellular anatomical structure organelle cytoplasm organelle membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR045141	N-alpha-acetyltransferase 60-like	Family
A, B, C, D	IPR000182	GNAT domain	Domain
A, B, C, D	IPR016181	Acyl-CoA N-acyltransferase	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C, D	Pharos: Q9H7X0	astrocytic tumor malignant mesothelioma large cell medulloblastoma ovarian cancer malignant glioma tuberculosis

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.