5L3K | pdb_00005l3k

Structure of Mycobacterium thermoresistibile trehalose-6-phosphate synthase in a ternary complex with ADP and fructose-6-phosphate

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
H	d5l3kh_	Alpha and beta proteins (a/b)	UDP-Glycosyltransferase/glycogen phosphorylase	UDP-Glycosyltransferase/glycogen phosphorylase	automated matches	automated matches	(Mycolicibacterium thermoresistibile ) [TaxId: 1797 ],	SCOPe (2.08)
G	d5l3kg_	Alpha and beta proteins (a/b)	UDP-Glycosyltransferase/glycogen phosphorylase	UDP-Glycosyltransferase/glycogen phosphorylase	automated matches	automated matches	(Mycolicibacterium thermoresistibile ) [TaxId: 1797 ],	SCOPe (2.08)
F	d5l3kf_	Alpha and beta proteins (a/b)	UDP-Glycosyltransferase/glycogen phosphorylase	UDP-Glycosyltransferase/glycogen phosphorylase	automated matches	automated matches	(Mycolicibacterium thermoresistibile ) [TaxId: 1797 ],	SCOPe (2.08)
E	d5l3ke_	Alpha and beta proteins (a/b)	UDP-Glycosyltransferase/glycogen phosphorylase	UDP-Glycosyltransferase/glycogen phosphorylase	automated matches	automated matches	(Mycolicibacterium thermoresistibile ) [TaxId: 1797 ],	SCOPe (2.08)
D	d5l3kd_	Alpha and beta proteins (a/b)	UDP-Glycosyltransferase/glycogen phosphorylase	UDP-Glycosyltransferase/glycogen phosphorylase	automated matches	automated matches	(Mycolicibacterium thermoresistibile ) [TaxId: 1797 ],	SCOPe (2.08)
C	d5l3kc_	Alpha and beta proteins (a/b)	UDP-Glycosyltransferase/glycogen phosphorylase	UDP-Glycosyltransferase/glycogen phosphorylase	automated matches	automated matches	(Mycolicibacterium thermoresistibile ) [TaxId: 1797 ],	SCOPe (2.08)
B	d5l3kb_	Alpha and beta proteins (a/b)	UDP-Glycosyltransferase/glycogen phosphorylase	UDP-Glycosyltransferase/glycogen phosphorylase	automated matches	automated matches	(Mycolicibacterium thermoresistibile ) [TaxId: 1797 ],	SCOPe (2.08)
A	d5l3ka_	Alpha and beta proteins (a/b)	UDP-Glycosyltransferase/glycogen phosphorylase	UDP-Glycosyltransferase/glycogen phosphorylase	automated matches	automated matches	(Mycolicibacterium thermoresistibile ) [TaxId: 1797 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H	SCOP2B Superfamily	Type B glycosyltransferase-like	8079968	3001586	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Type B glycosyltransferase-like	8079968	3001586	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Type B glycosyltransferase-like	8079968	3001586	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Type B glycosyltransferase-like	8079968	3001586	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Type B glycosyltransferase-like	8079968	3001586	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Type B glycosyltransferase-like	8079968	3001586	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Type B glycosyltransferase-like	8079968	3001586	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Type B glycosyltransferase-like	8079968	3001586	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	e5l3kH1	A: Repetitive alpha hairpins	X: Nucleotidyltransferase	H: Nucleotidyltransferase	T:	F:	ECOD (20:10:01)
G	e5l3kG1	A: Repetitive alpha hairpins	X: Nucleotidyltransferase	H: Nucleotidyltransferase	T:	F:	ECOD (20:10:01)
F	e5l3kF1	A: Repetitive alpha hairpins	X: Nucleotidyltransferase	H: Nucleotidyltransferase	T:	F:	ECOD (20:10:01)
E	e5l3kE1	A: Repetitive alpha hairpins	X: Nucleotidyltransferase	H: Nucleotidyltransferase	T:	F:	ECOD (20:10:01)
D	e5l3kD1	A: Repetitive alpha hairpins	X: Nucleotidyltransferase	H: Nucleotidyltransferase	T:	F:	ECOD (20:10:01)
C	e5l3kC1	A: Repetitive alpha hairpins	X: Nucleotidyltransferase	H: Nucleotidyltransferase	T:	F:	ECOD (20:10:01)
B	e5l3kB1	A: Repetitive alpha hairpins	X: Nucleotidyltransferase	H: Nucleotidyltransferase	T:	F:	ECOD (20:10:01)
A	e5l3kA1	A: Repetitive alpha hairpins	X: Nucleotidyltransferase	H: Nucleotidyltransferase	T:	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
H	3.40.50.2000	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Glycogen Phosphorylase B	CATH (4.3.0)
G	3.40.50.2000	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Glycogen Phosphorylase B	CATH (4.3.0)
F	3.40.50.2000	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Glycogen Phosphorylase B	CATH (4.3.0)
E	3.40.50.2000	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Glycogen Phosphorylase B	CATH (4.3.0)
D	3.40.50.2000	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Glycogen Phosphorylase B	CATH (4.3.0)
C	3.40.50.2000	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Glycogen Phosphorylase B	CATH (4.3.0)
B	3.40.50.2000	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Glycogen Phosphorylase B	CATH (4.3.0)
A	3.40.50.2000	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Glycogen Phosphorylase B	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	Alpha,alpha-trehalose-phosphate synthase	UDP-glycosyltransferase activity glycosyltransferase activity alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity transferase activity glucosyltransferase activity hexosyltransferase activity catalytic activity UDP-glucosyltransferase activity binding nucleoside phosphate binding nucleotide binding heterocyclic compound binding small molecule binding	carbohydrate metabolic process trehalose metabolic process carbohydrate biosynthetic process oligosaccharide metabolic process primary metabolic process disaccharide metabolic process disaccharide biosynthetic process biosynthetic process oligosaccharide biosynthetic process trehalose biosynthetic process metabolic process cellular process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR001830	Glycosyl transferase, family 20	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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