Structure of the 40S ABCE1 post-splitting complex in ribosome recycling and translation initiation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| H [auth V] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8053083 | 3000433 | SCOP2B (2022-06-29) |
| F [auth T] | SCOP2B Superfamily | GS N-terminal domain-like | 8053173 | 3000408 | SCOP2B (2022-06-29) |
| E [auth S] | SCOP2B Superfamily | Alpha-L RNA-binding motif | 8052758 | 3001473 | SCOP2B (2022-06-29) |
| E [auth S] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8052760 | 3000334 | SCOP2B (2022-06-29) |
| E [auth S] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8052759 | 3000135 | SCOP2B (2022-06-29) |
| C [auth Q] | SCOP2B Superfamily | Ribosomal S3Ae-like | 8053211 | 3002166 | SCOP2B (2022-06-29) |
| T [auth h] | SCOP2B Superfamily | ABC transporter-like P-loop ATPases | 8089770 | 3002020 | SCOP2B (2022-06-29) |
| T [auth h] | SCOP2B Superfamily | ABC transporter-like P-loop ATPases | 8089771 | 3002020 | SCOP2B (2022-06-29) |
| T [auth h] | SCOP2B Superfamily | 4Fe-4S ferredoxins | 8089767 | 3000020 | SCOP2B (2022-06-29) |
| B [auth P] | SCOP2B Superfamily | SIS domain/Ribosomal protein S2-like | 8061280 | 3001397 | SCOP2B (2022-06-29) |
| S [auth g] | SCOP2B Superfamily | Ribosomal protein S30e-like | 8053451 | 3002190 | SCOP2B (2022-06-29) |
| Q [auth e] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8093614 | 3000068 | SCOP2B (2022-06-29) |
| N [auth b] | SCOP2B Superfamily | Ribosomal protein S8 | 8096922 | 3000709 | SCOP2B (2022-06-29) |
| M [auth a] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8053136 | 3000068 | SCOP2B (2022-06-29) |
| L [auth Z] | SCOP2B Superfamily | Translational machinery components | 8095805 | 3000571 | SCOP2B (2022-06-29) |
| K [auth Y] | SCOP2B Superfamily | S15/NS1 RNA-binding domain | 8052974 | 3001284 | SCOP2B (2022-06-29) |
| K [auth Y] | SCOP2B Superfamily | Homeodomain-like | 8052973 | 3000001 | SCOP2B (2022-06-29) |
| J [auth X] | SCOP2B Superfamily | Ribosomal S17 N-terminal domain-like | 8052736 | 3002138 | SCOP2B (2022-06-29) |
| J [auth X] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8052738 | 3000135 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| I [auth W] | Aldedh | e5ll6W1 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat | T: Spectrin repeat | F: Aldedh | ECOD (develop294) |
| H [auth V] | Aldedh | e5ll6V1 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat | T: Spectrin repeat | F: Aldedh | ECOD (develop294) |
| G [auth U] | Aldedh | e5ll6U1 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat | T: Spectrin repeat | F: Aldedh | ECOD (develop294) |
| F [auth T] | Aldedh | e5ll6T1 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat | T: Spectrin repeat | F: Aldedh | ECOD (develop294) |
| E [auth S] | Aldedh | e5ll6S1 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat | T: Spectrin repeat | F: Aldedh | ECOD (develop294) |
| D [auth R] | PI3Ka | e5ll6R1 | A: alpha bundles | X: P-loop domains-like | H: Hemagglutinin HA2 chain | T: Hemagglutinin HA2 chain | F: PI3Ka | ECOD (develop294) |
| C [auth Q] | Aldedh | e5ll6Q1 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat | T: Spectrin repeat | F: Aldedh | ECOD (develop294) |
| T [auth h] | Aldedh | e5ll6h1 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat | T: Spectrin repeat | F: Aldedh | ECOD (develop294) |
| B [auth P] | Aldedh | e5ll6P1 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat | T: Spectrin repeat | F: Aldedh | ECOD (develop294) |
| S [auth g] | Aldedh | e5ll6g1 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat | T: Spectrin repeat | F: Aldedh | ECOD (develop294) |
| R [auth f] | Aldedh | e5ll6f1 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat | T: Spectrin repeat | F: Aldedh | ECOD (develop294) |
| Q [auth e] | Aldedh | e5ll6e1 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat | T: Spectrin repeat | F: Aldedh | ECOD (develop294) |
| P [auth d] | Aldedh | e5ll6d1 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat | T: Spectrin repeat | F: Aldedh | ECOD (develop294) |
| O [auth c] | Aldedh | e5ll6c1 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat | T: Spectrin repeat | F: Aldedh | ECOD (develop294) |
| N [auth b] | Aldedh | e5ll6b1 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat | T: Spectrin repeat | F: Aldedh | ECOD (develop294) |
| M [auth a] | Aldedh | e5ll6a1 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat | T: Spectrin repeat | F: Aldedh | ECOD (develop294) |
| L [auth Z] | Aldedh | e5ll6Z1 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat | T: Spectrin repeat | F: Aldedh | ECOD (develop294) |
| K [auth Y] | Aldedh | e5ll6Y1 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat | T: Spectrin repeat | F: Aldedh | ECOD (develop294) |
| J [auth X] | Aldedh | e5ll6X1 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat | T: Spectrin repeat | F: Aldedh | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| I [auth W] | PF00163 | Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4) | Ribosomal protein S4/S9 N-terminal domain | - | Family |
| I [auth W] | PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |
| H [auth V] | PF01201 | Ribosomal protein S8e (Ribosomal_S8e) | Ribosomal protein S8e | - | Family |
| G [auth U] | PF01251 | Ribosomal protein S7e (Ribosomal_S7e) | Ribosomal protein S7e | - | Family |
| F [auth T] | PF01092 | Ribosomal protein S6e (Ribosomal_S6e) | Ribosomal protein S6e | - | Family |
| E [auth S] | PF00900 | Ribosomal family S4e (Ribosomal_S4e) | Ribosomal family S4e | - | Family |
| E [auth S] | PF16121 | 40S ribosomal protein S4 C-terminus (40S_S4_C) | 40S ribosomal protein S4 C-terminus | - | Family |
| E [auth S] | PF08071 | RS4NT (NUC023) domain (RS4NT) | RS4NT (NUC023) domain | This is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1]. | Domain |
| E [auth S] | PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |
| E [auth S] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
| D [auth R] | PF03719 | Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C) | Ribosomal protein S5, C-terminal domain | Domain | |
| D [auth R] | PF00333 | Ribosomal protein S5, N-terminal domain (Ribosomal_S5) | Ribosomal protein S5, N-terminal domain | Domain | |
| B [auth P] | PF00318 | Ribosomal protein S2 (Ribosomal_S2) | Ribosomal protein S2 | - | Family |
| L [auth Z] | PF00411 | Ribosomal protein S11 (Ribosomal_S11) | Ribosomal protein S11 | - | Family |
| K [auth Y] | PF00312 | Ribosomal protein S15 (Ribosomal_S15) | Ribosomal protein S15 | Domain | |
| J [auth X] | PF00366 | Ribosomal protein S17 (Ribosomal_S17) | Ribosomal protein S17 | Domain | |
| J [auth X] | PF16205 | Ribosomal_S17 N-terminal (Ribosomal_S17_N) | Ribosomal_S17 N-terminal | - | Family |














