5TED
Effector binding domain of QuiR in complex with shikimate
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth A] | LysR_substrate_1 | e5tedA2 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: LysR_substrate_1 | ECOD (1.6) |
B [auth A] | LysR_substrate_2 | e5tedA1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: LysR_substrate_2 | ECOD (1.6) |
A [auth B] | LysR_substrate_1 | e5tedB2 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: LysR_substrate_1 | ECOD (1.6) |
A [auth B] | LysR_substrate_2 | e5tedB1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: LysR_substrate_2 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A] | PF03466 | LysR substrate binding domain (LysR_substrate) | LysR substrate binding domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth A] | IPR005119 | LysR, substrate-binding | Domain |
A [auth B], B [auth A] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
A [auth B], B [auth A] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |
A [auth B], B [auth A] | IPR000847 | Transcription regulator HTH, LysR | Domain |