5WK5 | pdb_00005wk5

Cryo-EM structure of P. aeruginosa flagellar filaments A443V

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	e5wk5F1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
J	e5wk5J1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
JA [auth j]	e5wk5j1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
KA [auth k]	e5wk5k1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
L	e5wk5L1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
OA [auth o]	e5wk5o1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
Z	e5wk5Z1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
Y	e5wk5Y1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
X	e5wk5X1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
W	e5wk5W1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
V	e5wk5V1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
U	e5wk5U1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
T	e5wk5T1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
S	e5wk5S1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
R	e5wk5R1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
Q	e5wk5Q1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
P	e5wk5P1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
O	e5wk5O1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
NA [auth n]	e5wk5n1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
N	e5wk5N1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
MA [auth m]	e5wk5m1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
M	e5wk5M1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
LA [auth l]	e5wk5l1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
K	e5wk5K1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
IA [auth i]	e5wk5i1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
I	e5wk5I1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
HA [auth h]	e5wk5h1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
H	e5wk5H1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
GA [auth g]	e5wk5g1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
G	e5wk5G1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
FA [auth f]	e5wk5f1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
EA [auth e]	e5wk5e1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
E	e5wk5E1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
DA [auth d]	e5wk5d1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
D	e5wk5D1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
CA [auth c]	e5wk5c1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
C	e5wk5C1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
BA [auth b]	e5wk5b1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
B	e5wk5B1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
AA [auth a]	e5wk5a1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)
A	e5wk5A1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: Peptidase_S26	F:	ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, EA [auth e], F, FA [auth f], G, GA [auth g], H, HA [auth h], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, Q, R, S, T, U, V, W, X, Y, Z	PF00700	Bacterial flagellin C-terminal helical region (Flagellin_C)	Bacterial flagellin C-terminal helical region	Flagellins polymerise to form bacterial flagella. There is some similarity between this entry and Pfam:PF00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate [2] and this is shown to be correct as structur ...	Flagellins polymerise to form bacterial flagella. There is some similarity between this entry and Pfam:PF00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate [2] and this is shown to be correct as structurally this domain forms an extended helix that interacts with the N-terminal region (Pfam:PF00669) to form the D0 and D1 structural domains [3]. These domains are responsible for the activation of TLR5, with the C-terminal D0 region playing a key role [4-6].	Domain
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, EA [auth e], F, FA [auth f], G, GA [auth g], H, HA [auth h], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, Q, R, S, T, U, V, W, X, Y, Z	PF00669	Bacterial flagellin N-terminal helical region (Flagellin_N)	Bacterial flagellin N-terminal helical region	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, EA [auth e], F, FA [auth f], G, GA [auth g], H, HA [auth h], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, Q, R, S, T, U, V, W, X, Y, Z	B-type flagellin	structural molecule activity	bacterial-type flagellum-dependent cell motility cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility	cell projection cellular anatomical structure organelle membraneless organelle bacterial-type flagellum extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, EA [auth e], F, FA [auth f], G, GA [auth g], H, HA [auth h], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, Q, R, S, T, U, V, W, X, Y, Z	IPR046358	Flagellin, C-terminal domain	Domain
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, EA [auth e], F, FA [auth f], G, GA [auth g], H, HA [auth h], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, Q, R, S, T, U, V, W, X, Y, Z	IPR001029	Flagellin, N-terminal domain	Domain
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, EA [auth e], F, FA [auth f], G, GA [auth g], H, HA [auth h], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, Q, R, S, T, U, V, W, X, Y, Z	IPR042187	Flagellin, C-terminal domain, subdomain 2	Homologous Superfamily
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, EA [auth e], F, FA [auth f], G, GA [auth g], H, HA [auth h], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, Q, R, S, T, U, V, W, X, Y, Z	IPR001492	Flagellin	Family
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, EA [auth e], F, FA [auth f], G, GA [auth g], H, HA [auth h], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, Q, R, S, T, U, V, W, X, Y, Z	IPR010810	Flagellin hook, IN motif	Conserved Site