Cryo-EM structure of human respiratory complex III (cytochrome bc1 complex)
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2 Family | Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8073736 | 4002057 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8073737 | 3000770 | SCOP2 (2022-06-29) |
| L [auth N] | SCOP2B Superfamily | Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8073737 | 3000770 | SCOP2B (2022-06-29) |
| B | SCOP2 Family | Ubiquinol-cytochrome c reductase 8 kDa protein | 8077331 | 4003766 | SCOP2 (2022-06-29) |
| B | SCOP2 Superfamily | Non-globular alpha+beta subunits of globular proteins | 8077332 | 3001542 | SCOP2 (2022-06-29) |
| M [auth O] | SCOP2B Superfamily | Non-globular alpha+beta subunits of globular proteins | 8077332 | 3001542 | SCOP2B (2022-06-29) |
| D | SCOP2 Family | Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8068584 | 4002059 | SCOP2 (2022-06-29) |
| D | SCOP2 Superfamily | Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8068585 | 3000779 | SCOP2 (2022-06-29) |
| O [auth Q] | SCOP2B Superfamily | Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8068585 | 3000779 | SCOP2B (2022-06-29) |
| E | SCOP2 Family | Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8068570 | 4002082 | SCOP2 (2022-06-29) |
| E | SCOP2 Superfamily | Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8068571 | 3000806 | SCOP2 (2022-06-29) |
| P [auth R] | SCOP2B Superfamily | Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8068571 | 3000806 | SCOP2B (2022-06-29) |
| F | SCOP2 Family | 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8068580 | 4002070 | SCOP2 (2022-06-29) |
| F | SCOP2 Superfamily | 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8068581 | 3000797 | SCOP2 (2022-06-29) |
| Q [auth S] | SCOP2B Superfamily | 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8068581 | 3000797 | SCOP2B (2022-06-29) |
| G | SCOP2 Family | Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8073350 | 4002065 | SCOP2 (2022-06-29) |
| G | SCOP2 Superfamily | Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8073351 | 3000787 | SCOP2 (2022-06-29) |
| R [auth T] | SCOP2B Superfamily | Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8073351 | 3000787 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | e5xteA1 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: AdoHcyase | F: | ECOD (20:10:01) | |
| L [auth N] | e5xteN1 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: AdoHcyase | F: | ECOD (20:10:01) | |
| B | e5xteB1 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: AdoHcyase | F: | ECOD (20:10:01) | |
| M [auth O] | e5xteO1 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: AdoHcyase | F: | ECOD (20:10:01) | |
| C | e5xteC1 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: AdoHcyase | F: | ECOD (20:10:01) | |
| C | e5xteC2 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: C1-set | F: | ECOD (20:10:01) | |
| N [auth P] | e5xteP2 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: AdoHcyase | F: | ECOD (20:10:01) | |
| N [auth P] | e5xteP3 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: C1-set | F: | ECOD (20:10:01) | |
| D | e5xteD1 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: AdoHcyase | F: | ECOD (20:10:01) | |
| O [auth Q] | e5xteQ1 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: AdoHcyase | F: | ECOD (20:10:01) | |
| E | e5xteE1 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: AdoHcyase | F: | ECOD (20:10:01) | |
| P [auth R] | e5xteR1 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: AdoHcyase | F: | ECOD (20:10:01) | |
| F | e5xteF1 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: AdoHcyase | F: | ECOD (20:10:01) | |
| Q [auth S] | e5xteS1 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: AdoHcyase | F: | ECOD (20:10:01) | |
| G | e5xteG1 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: AdoHcyase | F: | ECOD (20:10:01) | |
| R [auth T] | e5xteT1 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: AdoHcyase | F: | ECOD (20:10:01) | |
| H | e5xteH1 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: AdoHcyase | F: | ECOD (20:10:01) | |
| S [auth U] | e5xteU1 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: AdoHcyase | F: | ECOD (20:10:01) | |
| I [auth J] | e5xteJ1 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: AdoHcyase | F: | ECOD (20:10:01) | |
| T [auth V] | e5xteV1 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: AdoHcyase | F: | ECOD (20:10:01) | |
| J [auth K] | e5xteK1 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: AdoHcyase | F: | ECOD (20:10:01) | |
| U [auth W] | e5xteW1 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: AdoHcyase | F: | ECOD (20:10:01) | |
| K [auth L] | e5xteL1 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: AdoHcyase | F: | ECOD (20:10:01) | |
| V [auth Y] | e5xteY1 | A: TIM beta/alpha-barrel | X: TIM barrels | H: TIM barrels | T: AdoHcyase | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A, L [auth N] | PF02939 | UcrQ family (UcrQ) | UcrQ family | - | Family |
| B, M [auth O] | PF09165 | Ubiquinol-cytochrome c reductase 8 kDa, N-terminal (Ubiq-Cytc-red_N) | Ubiquinol-cytochrome c reductase 8 kDa, N-terminal | Members of this family adopt a structure consisting of many antiparallel beta sheets, with few alpha helices, in a non-globular arrangement. They are required for proper functioning of the respiratory chain [1]. | Domain |
| C, N [auth P] | PF02921 | Ubiquinol cytochrome reductase transmembrane region (UCR_TM) | Ubiquinol cytochrome reductase transmembrane region | - | Family |
| C, N [auth P] | PF00355 | Rieske [2Fe-2S] domain (Rieske) | Rieske [2Fe-2S] domain | The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ... | Domain |
| D, O [auth Q] | PF05365 | Cytochrome b-c1 complex subunit 9 (UCR_UQCRX_QCR9) | Cytochrome b-c1 complex subunit 9 | - | Family |
| E, P [auth R] | PF02320 | Ubiquinol-cytochrome C reductase hinge protein (UCR_hinge) | Ubiquinol-cytochrome C reductase hinge protein | The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex [1]. This Pfam family represents the 'hinge' protein of the complex which is thought to mediate formation of the cytochrome c1 and cytochrome c ... | Domain |
| F, Q [auth S] | PF02271 | Ubiquinol-cytochrome C reductase complex 14kD subunit (UCR_14kD) | Ubiquinol-cytochrome C reductase complex 14kD subunit | - | Family |
| G, R [auth T] | PF08997 | Ubiquinol-cytochrome C reductase complex, 6.4kD protein (UCR_6-4kD) | Ubiquinol-cytochrome C reductase complex, 6.4kD protein | The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is an essential component of the mitochondrial cellular respiratory chain. This family represents the 6.4kD protein, which may be closely linked to the iron-sulphur protein in the ... | Domain |
| H, S [auth U] | PF02167 | Cytochrome C1 family (Cytochrom_C1) | Cytochrome C1 family | - | Family |
| I [auth J], T [auth V] | PF00032 | Cytochrome b(C-terminal)/b6/petD (Cytochrom_B_C) | Cytochrome b(C-terminal)/b6/petD | Domain | |
| I [auth J], T [auth V] | PF00033 | Cytochrome b/b6/petB (Cytochrome_B) | Cytochrome b/b6/petB | Domain | |
| J [auth K], U [auth W] | PF05193 | Peptidase M16 inactive domain (Peptidase_M16_C) | Peptidase M16 inactive domain | Peptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1]. | Domain |
| J [auth K], U [auth W] | PF00675 | Insulinase (Peptidase family M16) (Peptidase_M16) | Insulinase (Peptidase family M16) | - | Family |
| K [auth L], V [auth Y] | PF05193 | Peptidase M16 inactive domain (Peptidase_M16_C) | Peptidase M16 inactive domain | Peptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1]. | Domain |
| K [auth L], V [auth Y] | PF00675 | Insulinase (Peptidase family M16) (Peptidase_M16) | Insulinase (Peptidase family M16) | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Alpha-helical polytopic | Electron transport chain complex III (bc1 and b6f) superfamily | Cytochrome bc1 and b6f complexes |














