5Z3R | pdb_00005z3r

Crystal Structure of Delta 5-3-Ketosteroid Isomerase from Mycobacterium sp.

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
H [auth B]	d5z3rb_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	Ketosteroid isomerase-like	Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI	(Mycolicibacterium neoaurum ) [TaxId: 1795 ],	SCOPe (2.08)
G [auth E]	d5z3re_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	Ketosteroid isomerase-like	Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI	(Mycolicibacterium neoaurum ) [TaxId: 1795 ],	SCOPe (2.08)
F [auth H]	d5z3rh_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	Ketosteroid isomerase-like	Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI	(Mycolicibacterium neoaurum ) [TaxId: 1795 ],	SCOPe (2.08)
E [auth G]	d5z3rg_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	Ketosteroid isomerase-like	Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI	(Mycolicibacterium neoaurum ) [TaxId: 1795 ],	SCOPe (2.08)
D [auth C]	d5z3rc_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	Ketosteroid isomerase-like	Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI	(Mycolicibacterium neoaurum ) [TaxId: 1795 ],	SCOPe (2.08)
C [auth F]	d5z3rf_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	Ketosteroid isomerase-like	Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI	(Mycolicibacterium neoaurum ) [TaxId: 1795 ],	SCOPe (2.08)
B [auth D]	d5z3rd_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	Ketosteroid isomerase-like	Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI	(Mycolicibacterium neoaurum ) [TaxId: 1795 ],	SCOPe (2.08)
A	d5z3ra_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	Ketosteroid isomerase-like	Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI	(Mycolicibacterium neoaurum ) [TaxId: 1795 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H [auth B]	SCOP2B Superfamily	NTF2-like	8070045	3000472	SCOP2B (2022-06-29)
G [auth E]	SCOP2B Superfamily	NTF2-like	8070045	3000472	SCOP2B (2022-06-29)
F [auth H]	SCOP2B Superfamily	NTF2-like	8070045	3000472	SCOP2B (2022-06-29)
E [auth G]	SCOP2B Superfamily	NTF2-like	8070045	3000472	SCOP2B (2022-06-29)
D [auth C]	SCOP2 Family	Ketosteroid isomerase-like	8070044	4001023	SCOP2 (2022-06-29)
D [auth C]	SCOP2 Superfamily	NTF2-like	8070045	3000472	SCOP2 (2022-06-29)
C [auth F]	SCOP2B Superfamily	NTF2-like	8070045	3000472	SCOP2B (2022-06-29)
B [auth D]	SCOP2B Superfamily	NTF2-like	8070045	3000472	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	NTF2-like	8070045	3000472	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H [auth B]	ATP-synt_VA_C	e5z3rB1	A: alpha bundles	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: ATP-synt_VA_C	ECOD (develop294)
G [auth E]	ATP-synt_VA_C	e5z3rE1	A: alpha bundles	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: ATP-synt_VA_C	ECOD (develop294)
F [auth H]	ATP-synt_VA_C	e5z3rH1	A: alpha bundles	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: ATP-synt_VA_C	ECOD (develop294)
E [auth G]	ATP-synt_VA_C	e5z3rG1	A: alpha bundles	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: ATP-synt_VA_C	ECOD (develop294)
D [auth C]	ATP-synt_VA_C	e5z3rC1	A: alpha bundles	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: ATP-synt_VA_C	ECOD (develop294)
C [auth F]	Chromo	e5z3rF1	A: alpha bundles	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: Chromo	ECOD (develop294)
B [auth D]	ATP-synt_VA_C	e5z3rD1	A: alpha bundles	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: ATP-synt_VA_C	ECOD (develop294)
A	ATP-synt_VA_C	e5z3rA1	A: alpha bundles	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: ATP-synt_VA_C	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
H [auth B]	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
G [auth E]	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
F [auth H]	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
E [auth G]	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
D [auth C]	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
C [auth F]	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
B [auth D]	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
A	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B [auth D], C [auth F], D [auth C], E [auth G], A, B [auth D], C [auth F], D [auth C], E [auth G], F [auth H], G [auth E], H [auth B]	PF12680	SnoaL-like domain (SnoaL_2)	SnoaL-like domain	This family contains a large number of proteins that share the SnoaL fold.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B [auth D], C [auth F], D [auth C], E [auth G], A, B [auth D], C [auth F], D [auth C], E [auth G], F [auth H], G [auth E], H [auth B]	Steroid delta-isomerase	isomerase activity catalytic activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B [auth D], C [auth F], D [auth C], E [auth G], A, B [auth D], C [auth F], D [auth C], E [auth G], F [auth H], G [auth E], H [auth B]	IPR032710	NTF2-like domain superfamily	Homologous Superfamily
A, B [auth D], C [auth F], D [auth C], E [auth G], A, B [auth D], C [auth F], D [auth C], E [auth G], F [auth H], G [auth E], H [auth B]	IPR037401	SnoaL-like domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.