6BNP
CryoEM structure of MyosinVI-actin complex in the rigor (nucleotide-free) state
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
G [auth A] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
G [auth A] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
H [auth B] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
H [auth B] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
I [auth C] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
I [auth C] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
J [auth D] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
J [auth D] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
K [auth E] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
K [auth E] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
L [auth F] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
L [auth F] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
M [auth G] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
M [auth G] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
N [auth H] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
N [auth H] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth I] | F_UNCLASSIFIED | e6bnpI2 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: F_UNCLASSIFIED | ECOD (1.6) |
A [auth I] | PF00063 | e6bnpI1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00063 | ECOD (1.6) |
B [auth J] | F_UNCLASSIFIED | e6bnpJ1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth J] | PF00063 | e6bnpJ2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00063 | ECOD (1.6) |
C [auth K] | F_UNCLASSIFIED | e6bnpK2 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: F_UNCLASSIFIED | ECOD (1.6) |
C [auth K] | PF00063 | e6bnpK1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00063 | ECOD (1.6) |
D [auth L] | F_UNCLASSIFIED | e6bnpL1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: F_UNCLASSIFIED | ECOD (1.6) |
D [auth L] | PF00063 | e6bnpL2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00063 | ECOD (1.6) |
E [auth M] | F_UNCLASSIFIED | e6bnpM2 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: F_UNCLASSIFIED | ECOD (1.6) |
E [auth M] | PF00063 | e6bnpM1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00063 | ECOD (1.6) |
F [auth N] | F_UNCLASSIFIED | e6bnpN2 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: F_UNCLASSIFIED | ECOD (1.6) |
F [auth N] | PF00063 | e6bnpN1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00063 | ECOD (1.6) |
G [auth A] | PF00022 | e6bnpA2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
H [auth B] | PF00022 | e6bnpB2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
I [auth C] | PF00022 | e6bnpC1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
J [auth D] | PF00022 | e6bnpD1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
K [auth E] | PF00022 | e6bnpE1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
L [auth F] | PF00022 | e6bnpF2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
M [auth G] | PF00022 | e6bnpG1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
N [auth H] | PF00022 | e6bnpH1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00063 | Myosin head (motor domain) (Myosin_head) | Myosin head (motor domain) | - | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036961 | Kinesin motor domain superfamily | Homologous Superfamily | |
IPR049016 | Myosin VI, lever arm | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR036114 | Class VI myosin, motor domain | Domain | |
IPR001609 | Myosin head, motor domain | Domain | |
IPR032412 | Myosin VI, cargo binding domain | Domain | |
IPR004009 | Myosin, N-terminal, SH3-like | Domain | |
IPR008989 | Myosin S1 fragment, N-terminal | Homologous Superfamily | |
IPR020902 | Actin/actin-like conserved site | Conserved Site | |
IPR043129 | ATPase, nucleotide binding domain | Homologous Superfamily | |
IPR004001 | Actin, conserved site | Conserved Site | |
IPR004000 | Actin family | Family |