Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth B]SCOP2B SuperfamilyUbiquitin-like 8038575 3000157 SCOP2B (2022-06-29)
C [auth E]SCOP2B SuperfamilyUbiquitin-like 8038575 3000157 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth B]e6c5xB1 A: OB-foldX: Nucleic acid-binding proteinH: NucleotidyltransferaseT: Adeno_knobF:ECOD (20:10:01)
C [auth E]e6c5xE1 A: OB-foldX: Nucleic acid-binding proteinH: NucleotidyltransferaseT: Cytochrom_B562F:ECOD (20:10:01)
D [auth F]e6c5xF1 A: OB-foldX: Nucleic acid-binding proteinH: NucleotidyltransferaseT: Adeno_knobF:ECOD (20:10:01)
B [auth C]e6c5xC1 A: OB-foldX: Nucleic acid-binding proteinH: NucleotidyltransferaseT: Cytochrom_B562F:ECOD (20:10:01)
F [auth A]e6c5xA1 A: OB-foldX: Nucleic acid-binding proteinH: NucleotidyltransferaseT: Cytochrom_B562F:ECOD (20:10:01)
E [auth D]e6c5xD1 A: OB-foldX: Nucleic acid-binding proteinH: NucleotidyltransferaseT: Adeno_knobF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth B],
C [auth E]
PF00240Ubiquitin family (ubiquitin)Ubiquitin familyThis family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ...This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry a distinctive five-residue motif termed the proteasome-interacting motif (PIM), which may have a biologically significant role in protein delivery to proteasomes and recruitment of proteasomes to transcription sites [5].
Domain
B [auth C],
D [auth F]
PF03931Skp1 family, tetramerisation domain (Skp1_POZ)Skp1 family, tetramerisation domainDomain
E [auth D],
F [auth A]
PF00017SH2 domain (SH2)SH2 domainDomain
E [auth D],
F [auth A]
PF07525SOCS box (SOCS_box)SOCS boxThe SOCS box acts as a bridge between specific substrate- binding domains and more generic proteins that comprise a large family of E3 ubiquitin protein ligases. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth B],
C [auth E]
Elongin-B
B [auth C],
D [auth F]
Elongin-C
E [auth D],
F [auth A]
Suppressor of Cytokine Signalling 1
GP130 peptide fragment

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
PTR Parent Component: TYR

RESIDAA0039

PSI-MOD :  O4'-phospho-L-tyrosine MOD:00048