6EO0
Zebrafish Sirt5 in complex with stalled peptidylimidate and bicyclic intermediate of inhibitory compound 29
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | DHS-like NAD/FAD-binding domain | 8063726 | 3001728 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | DHS-like NAD/FAD-binding domain | 8063726 | 3001728 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | DHS-like NAD/FAD-binding domain | 8063726 | 3001728 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | DHS-like NAD/FAD-binding domain | 8063726 | 3001728 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | SIR2_1st | e6eo0A1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: DHS-like NAD/FAD-binding domain | F: SIR2_1st | ECOD (1.6) |
A | SIR2_2nd_4 | e6eo0A2 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: SIR2_2nd_4 | ECOD (1.6) |
B | SIR2_1st | e6eo0B2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: DHS-like NAD/FAD-binding domain | F: SIR2_1st | ECOD (1.6) |
B | SIR2_2nd_4 | e6eo0B1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: SIR2_2nd_4 | ECOD (1.6) |
C | SIR2_1st | e6eo0C1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: DHS-like NAD/FAD-binding domain | F: SIR2_1st | ECOD (1.6) |
C | SIR2_2nd_4 | e6eo0C2 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: SIR2_2nd_4 | ECOD (1.6) |
D | SIR2_1st | e6eo0D1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: DHS-like NAD/FAD-binding domain | F: SIR2_1st | ECOD (1.6) |
D | SIR2_2nd_4 | e6eo0D2 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: SIR2_2nd_4 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.1220 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | TPP-binding domain | CATH (4.3.0) |
A | 3.30.1600.10 | Alpha Beta | 2-Layer Sandwich | SIR2/SIRT2 'Small Domain' | SIR2/SIRT2 'Small Domain' | CATH (4.3.0) |
B | 3.40.50.1220 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | TPP-binding domain | CATH (4.3.0) |
B | 3.30.1600.10 | Alpha Beta | 2-Layer Sandwich | SIR2/SIRT2 'Small Domain' | SIR2/SIRT2 'Small Domain' | CATH (4.3.0) |
C | 3.40.50.1220 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | TPP-binding domain | CATH (4.3.0) |
C | 3.30.1600.10 | Alpha Beta | 2-Layer Sandwich | SIR2/SIRT2 'Small Domain' | SIR2/SIRT2 'Small Domain' | CATH (4.3.0) |
D | 3.40.50.1220 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | TPP-binding domain | CATH (4.3.0) |
D | 3.30.1600.10 | Alpha Beta | 2-Layer Sandwich | SIR2/SIRT2 'Small Domain' | SIR2/SIRT2 'Small Domain' | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR027546 | Sirtuin, class III | Family | |
IPR026590 | Sirtuin family, catalytic core domain | Domain | |
IPR050134 | NAD-dependent sirtuin protein deacylases | Family | |
IPR026591 | Sirtuin, catalytic core small domain superfamily | Homologous Superfamily | |
IPR003000 | Sirtuin family | Family | |
IPR029035 | DHS-like NAD/FAD-binding domain superfamily | Homologous Superfamily |