6EUO | pdb_00006euo

Crystal structure of APO Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO5

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	TIP49_C	e6euoA1	A: alpha bundles	X: PriB N-terminal domain-like	H: HTH	T: SH3	F: TIP49_C	ECOD (develop294)
B	TIP49_C	e6euoB1	A: alpha bundles	X: PriB N-terminal domain-like	H: HTH	T: SH3	F: TIP49_C	ECOD (develop294)
D	TIP49_C	e6euoD1	A: alpha bundles	X: PriB N-terminal domain-like	H: HTH	T: SH3	F: TIP49_C	ECOD (develop294)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	L-lysine 4-hydroxylase	oxidoreductase activity oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 2-oxoglutarate-dependent dioxygenase activity catalytic activity dioxygenase activity cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR042098	Glutarate 2-hydroxylase superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.