6IHC
Crystal structure of (3R)-Hydroxyacyl-Acyl Carrier Protein Dehydratase(FabZ) Y100A mutant in complex with holo-ACP from Helicobacter pylori
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
D | SCOP2B Superfamily | Thioesterase/thiol ester dehydrase-isomerase-like | 8088180 | 3000149 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Thioesterase/thiol ester dehydrase-isomerase-like | 8088180 | 3000149 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Thioesterase/thiol ester dehydrase-isomerase-like | 8088180 | 3000149 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Thioesterase/thiol ester dehydrase-isomerase-like | 8088180 | 3000149 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Thioesterase/thiol ester dehydrase-isomerase-like | 8088180 | 3000149 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Thioesterase/thiol ester dehydrase-isomerase-like | 8088180 | 3000149 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | ACP-like | 8074630 | 3001805 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D | FabA | e6ihcD1 | A: a+b two layers | X: Thioesterase/thiol ester dehydrase-isomerase-like | H: Thioesterase/thiol ester dehydrase-isomerase (From Topology) | T: Thioesterase/thiol ester dehydrase-isomerase | F: FabA | ECOD (1.6) |
A | FabA | e6ihcA1 | A: a+b two layers | X: Thioesterase/thiol ester dehydrase-isomerase-like | H: Thioesterase/thiol ester dehydrase-isomerase (From Topology) | T: Thioesterase/thiol ester dehydrase-isomerase | F: FabA | ECOD (1.6) |
B | FabA | e6ihcB1 | A: a+b two layers | X: Thioesterase/thiol ester dehydrase-isomerase-like | H: Thioesterase/thiol ester dehydrase-isomerase (From Topology) | T: Thioesterase/thiol ester dehydrase-isomerase | F: FabA | ECOD (1.6) |
C | FabA | e6ihcC1 | A: a+b two layers | X: Thioesterase/thiol ester dehydrase-isomerase-like | H: Thioesterase/thiol ester dehydrase-isomerase (From Topology) | T: Thioesterase/thiol ester dehydrase-isomerase | F: FabA | ECOD (1.6) |
E | FabA | e6ihcE1 | A: a+b two layers | X: Thioesterase/thiol ester dehydrase-isomerase-like | H: Thioesterase/thiol ester dehydrase-isomerase (From Topology) | T: Thioesterase/thiol ester dehydrase-isomerase | F: FabA | ECOD (1.6) |
F | FabA | e6ihcF1 | A: a+b two layers | X: Thioesterase/thiol ester dehydrase-isomerase-like | H: Thioesterase/thiol ester dehydrase-isomerase (From Topology) | T: Thioesterase/thiol ester dehydrase-isomerase | F: FabA | ECOD (1.6) |
G | PP-binding | e6ihcG1 | A: alpha bundles | X: ACP-like | H: Acyl-carrier protein (ACP) (From Topology) | T: Acyl-carrier protein (ACP) | F: PP-binding | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
D | 3.10.129.10 | Alpha Beta | Roll | Thiol Ester Dehydrase | Chain A | CATH (utative) |
A | 3.10.129.10 | Alpha Beta | Roll | Thiol Ester Dehydrase | Chain A | CATH (utative) |
B | 3.10.129.10 | Alpha Beta | Roll | Thiol Ester Dehydrase | Chain A | CATH (utative) |
C | 3.10.129.10 | Alpha Beta | Roll | Thiol Ester Dehydrase | Chain A | CATH (utative) |
E | 3.10.129.10 | Alpha Beta | Roll | Thiol Ester Dehydrase | Chain A | CATH (utative) |
F | 3.10.129.10 | Alpha Beta | Roll | Thiol Ester Dehydrase | Chain A | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF07977 | FabA-like domain (FabA) | FabA-like domain | This enzyme domain has a HotDog fold. | Domain | |
PF00550 | Phosphopantetheine attachment site (PP-binding) | Phosphopantetheine attachment site | A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes memb ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR010084 | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ | Family | |
IPR013114 | Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ | Family | |
IPR029069 | HotDog domain superfamily | Homologous Superfamily | |
IPR006162 | Phosphopantetheine attachment site | PTM | |
IPR020806 | Polyketide synthase, phosphopantetheine-binding domain | Domain | |
IPR009081 | Phosphopantetheine binding ACP domain | Domain | |
IPR036736 | ACP-like superfamily | Homologous Superfamily | |
IPR003231 | Acyl carrier protein | Family |