6J7M | pdb_00006j7m

Complex structure of the Pseudomonas aeruginosa rhamnosyltransferase EarP with the acceptor elongation factor EF-P


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Ae6j7mA1 A: P-loop domains-likeX: P-loop domains-relatedH: P-loop containing nucleoside triphosphate hydrolasesT: NUDIXF:ECOD (20:10:01)
B [auth C]e6j7mC1 A: P-loop domains-likeX: P-loop domains-relatedH: P-loop containing nucleoside triphosphate hydrolasesT: NUDIXF:ECOD (20:10:01)
C [auth M]e6j7mM1 A: HUP domain-likeX: HUP domainsH: HUP domainsT: RRM_1F:ECOD (20:10:01)
D [auth N]e6j7mN1 A: jelly-rollX: P-loop domains-relatedH: P-loop containing nucleoside triphosphate hydrolasesT:F:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
B [auth C]
PF10093Elongation-Factor P (EF-P) rhamnosyltransferase EarP (EarP)Elongation-Factor P (EF-P) rhamnosyltransferase EarP- Family
C [auth M],
D [auth N]
PF09285Elongation factor P, C-terminal (Elong-fact-P_C)Elongation factor P, C-terminalMembers of this family of nucleic acid binding domains are predominantly found in elongation factor P, where they adopt an OB-fold, with five beta-strands forming a beta-barrel in a Greek-key topology [1]. Domain
C [auth M],
D [auth N]
PF01132Elongation factor P (EF-P) OB domain (EFP)Elongation factor P (EF-P) OB domainDomain
C [auth M],
D [auth N]
PF08207Elongation factor P (EF-P) KOW-like domain (EFP_N)Elongation factor P (EF-P) KOW-like domainDomain