6N8K | pdb_00006n8k

Cryo-EM structure of early cytoplasmic-immediate (ECI) pre-60S ribosomal subunit

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
H [auth c]SCOP2B SuperfamilyL30e-like 8039862 3001739 SCOP2B (2022-06-29)
G [auth C]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like 8052815 3002143 SCOP2B (2022-06-29)
G [auth C]SCOP2B SuperfamilyRibosomal protein L4 8052816 3001146 SCOP2B (2022-06-29)
E [auth B]SCOP2B SuperfamilyTranslational proteins 8078363 3000811 SCOP2B (2022-06-29)
SA [auth o]SCOP2B SuperfamilyRibosomal protein L29e 8053045 3002157 SCOP2B (2022-06-29)
QA [auth J]SCOP2B SuperfamilyRL5-like 8073884 3001709 SCOP2B (2022-06-29)
PA [auth D]SCOP2B SuperfamilyTranslational machinery components 8052875 3000571 SCOP2B (2022-06-29)
NA [auth Z]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053046 3000334 SCOP2B (2022-06-29)
MA [auth y]SCOP2B SuperfamilyPentein 8036230 3000640 SCOP2B (2022-06-29)
LA [auth Y]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8076760 3000334 SCOP2B (2022-06-29)
KA [auth X]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8095962 3000210 SCOP2B (2022-06-29)
IA [auth V]SCOP2B Superfamily50S Ribosomal protein L14-like 8103364 3000433 SCOP2B (2022-06-29)
HA [auth U]SCOP2B Superfamily60S Ribosomal protein L22e 8053058 3002158 SCOP2B (2022-06-29)
EA [auth R]SCOP2B SuperfamilyRibosomal protein L19 (L19e) 8077485 3000890 SCOP2B (2022-06-29)
DA [auth Q]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8095970 3001045 SCOP2B (2022-06-29)
CA [auth P]SCOP2B SuperfamilyRibosomal protein L22 8076708 3001078 SCOP2B (2022-06-29)
BA [auth O]SCOP2B SuperfamilyRibosomal protein L13 8066053 3001134 SCOP2B (2022-06-29)
Z [auth N]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8082481 3000210 SCOP2B (2022-06-29)
Y [auth p]SCOP2B SuperfamilyZn-binding ribosomal proteins 8103126 3001320 SCOP2B (2022-06-29)
W [auth l]SCOP2B SuperfamilyRibosomal protein L39e 8078549 3001756 SCOP2B (2022-06-29)
V [auth L]SCOP2B SuperfamilyRibosomal protein L13e-like 8053159 3002162 SCOP2B (2022-06-29)
U [auth k]SCOP2B SuperfamilyRibosomal L38e protein-like 8053562 3002206 SCOP2B (2022-06-29)
T [auth j]SCOP2B SuperfamilyZn-binding ribosomal proteins 8080044 3001320 SCOP2B (2022-06-29)
S [auth i]SCOP2B SuperfamilyRibosomal protein L36e 8053115 3002161 SCOP2B (2022-06-29)
O [auth g]SCOP2B SuperfamilyRibosomal protein L34e-like 8053547 3002203 SCOP2B (2022-06-29)
N [auth G]SCOP2B SuperfamilyL30e-like 8063962 3001739 SCOP2B (2022-06-29)
M [auth f]SCOP2B SuperfamilyTranslational proteins 8087451 3000811 SCOP2B (2022-06-29)
L [auth F]SCOP2B SuperfamilyRibosomal L30p/L7e protein, N-terminal domain-lke 8052916 3002152 SCOP2B (2022-06-29)
L [auth F]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8052917 3001378 SCOP2B (2022-06-29)
J [auth E]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053109 3000334 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth d]e6n8kd1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
H [auth c]e6n8kc1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
G [auth C]e6n8kC2 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
G [auth C]e6n8kC3 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: Ephrin_lbdF:ECOD (20:10:01)
E [auth B]e6n8kB1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
SA [auth o]e6n8ko1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
RA [auth q]e6n8kq1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
QA [auth J]e6n8kJ1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
PA [auth D]e6n8kD1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
NA [auth Z]e6n8kZ1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
D [auth a]e6n8ka1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
MA [auth y]e6n8ky1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
LA [auth Y]e6n8kY1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
KA [auth X]e6n8kX1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
JA [auth W]e6n8kW1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
IA [auth V]e6n8kV1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
HA [auth U]e6n8kU1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
FA [auth S]e6n8kS1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
EA [auth R]e6n8kR1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
DA [auth Q]e6n8kQ1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
C [auth A]e6n8kA1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
CA [auth P]e6n8kP1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
BA [auth O]e6n8kO1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
Z [auth N]e6n8kN1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
Y [auth p]e6n8kp1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
X [auth M]e6n8kM1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
W [auth l]e6n8kl1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
V [auth L]e6n8kL1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
U [auth k]e6n8kk1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
T [auth j]e6n8kj1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
B [auth v]e6n8kv1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
S [auth i]e6n8ki1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
R [auth h]e6n8kh1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
Q [auth H]e6n8kH1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
P [auth I]e6n8kI1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
O [auth g]e6n8kg1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
N [auth G]e6n8kG1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
M [auth f]e6n8kf1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
L [auth F]e6n8kF1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
K [auth e]e6n8ke1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)
J [auth E]e6n8kE1 A: PriB N-terminal domain-likeX: Rubredoxin-relatedH: Aconitase iron-sulfur domainT:F:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
G [auth C]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins. Domain
G [auth C]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
E [auth B]PF17835NOG1 N-terminal helical domain (NOG1_N)NOG1 N-terminal helical domainThis domain is found at the N-terminus of NOG1 GTPase proteins. Domain
E [auth B]PF06858Nucleolar GTP-binding protein 1 (NOG1) (NOG1)Nucleolar GTP-binding protein 1 (NOG1)- Family
QA [auth J]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
QA [auth J]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
PA [auth D]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
PA [auth D]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
PA [auth D]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins. Domain
NA [auth Z]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
LA [auth Y]PF01912eIF-6 family (eIF-6)eIF-6 family- Family
LA [auth Y]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
LA [auth Y]PF00467KOW motif (KOW)KOW motif- Family
KA [auth X]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
JA [auth W]PF17777Insertion domain in 60S ribosomal protein L10P (RL10P_insert)Insertion domain in 60S ribosomal protein L10PThis domain is found in prokaryotic and archaeal ribosomal L10 protein [1]. Domain
JA [auth W]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
IA [auth V]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
HA [auth U]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24eDomain
HA [auth U]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
FA [auth S]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A. Domain
EA [auth R]PF01280Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e)Ribosomal protein L19e, N-terminal domainThis domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
EA [auth R]PF25476Ribosomal protein L19e, C-terminal domain (Ribosomal_L19e_C)Ribosomal protein L19e, C-terminal domainThis domain is found at the C-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
DA [auth Q]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
C [auth A]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
C [auth A]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
CA [auth P]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
CA [auth P]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
BA [auth O]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
Z [auth N]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
X [auth M]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
X [auth M]PF00467KOW motif (KOW)KOW motif- Family
V [auth L]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
V [auth L]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
Q [auth H]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
Q [auth H]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
P [auth I]PF12171Zinc-finger double-stranded RNA-binding (zf-C2H2_jaz)Zinc-finger double-stranded RNA-binding- Family
P [auth I]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
N [auth G]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
L [auth F]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
L [auth F]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35AeThis entry represents the ribosomal eL33 previously known as L35A, eukaryotic and archaebacterial ribosomal proteins. Domain
J [auth E]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
J [auth E]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth d]60S ribosomal protein L31-A
H [auth c]60S ribosomal protein L30
G [auth C]60S ribosomal protein L4-A
F [auth b]Nucleolar GTP-binding protein 1
E [auth B]60S ribosomal protein L3
VA [auth 3]5.8S rRNA---
UA [auth 2]5S rRNA---
TA [auth 1]Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA---
SA [auth o]60S ribosomal protein L29
RA [auth q]60S ribosomal protein L42-A
QA [auth J]60S ribosomal protein L11-A
PA [auth D]60S ribosomal protein L5
OA [auth z]UPF0642 protein YBL028C- -
NA [auth Z]60S ribosomal protein L27-A
D [auth a]60S ribosomal protein L28
MA [auth y]Eukaryotic translation initiation factor 6
LA [auth Y]60S ribosomal protein L26-A
KA [auth X]60S ribosomal protein L25
JA [auth W]Ribosome assembly factor MRT4
IA [auth V]60S ribosomal protein L23-A
HA [auth U]60S ribosomal protein L22-A
GA [auth T]60S ribosomal protein L21-A
FA [auth S]60S ribosomal protein L20-A
EA [auth R]60S ribosomal protein L19-A
DA [auth Q]60S ribosomal protein L18-A
C [auth A]60S ribosomal protein L2-A
CA [auth P]60S ribosomal protein L17-A
BA [auth O]60S ribosomal protein L16-A
AA [auth u]Ribosome biogenesis protein RLP24
Z [auth N]60S ribosomal protein L15-A
Y [auth p]60S ribosomal protein L43-A
X [auth M]60S ribosomal protein L14-A
W [auth l]60S ribosomal protein L39
V [auth L]60S ribosomal protein L13-A
U [auth k]60S ribosomal protein L38
T [auth j]60S ribosomal protein L37-A
B [auth v]60S ribosomal export protein NMD3
S [auth i]60S ribosomal protein L36-A
R [auth h]60S ribosomal protein L35-A
Q [auth H]60S ribosomal protein L9-A
P [auth I]Bud site selection protein 20
O [auth g]60S ribosomal protein L34-A
N [auth G]60S ribosomal protein L8-A
M [auth f]60S ribosomal protein L33-A
L [auth F]60S ribosomal protein L7-A
K [auth e]60S ribosomal protein L32
J [auth E]60S ribosomal protein L6-A
A [auth s]Ribosomal Protein uL1---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth d]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
I [auth d]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
I [auth d]IPR000054Large ribosomal subunit protein eL31Family
H [auth c]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
H [auth c]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
H [auth c]IPR039109Large ribosomal subunit protein eL30-likeFamily
H [auth c]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
G [auth C]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
G [auth C]IPR002136Large ribosomal subunit protein uL4Family
G [auth C]IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
G [auth C]IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
G [auth C]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
F [auth b]IPR024926Nucleolar GTP-binding protein 1Family
F [auth b]IPR031167OBG-type guanine nucleotide-binding (G) domainDomain
F [auth b]IPR012973NOG, C-terminalDomain
F [auth b]IPR010674Nucleolar GTP-binding protein 1, Rossman-fold domainDomain
F [auth b]IPR041623NOG1, N-terminal helical domainDomain
F [auth b]IPR006073GTP binding domainDomain
F [auth b]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
E [auth B]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
E [auth B]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
E [auth B]IPR000597Large ribosomal subunit protein uL3Family
E [auth B]IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
E [auth B]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
SA [auth o]IPR002673Large ribosomal subunit protein eL29Family
RA [auth q]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
RA [auth q]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
RA [auth q]IPR000552Large ribosomal subunit protein eL42Family
QA [auth J]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
QA [auth J]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
QA [auth J]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
QA [auth J]IPR057266Large ribosomal subunit protein uL5, eukaryota/archaeaFamily
QA [auth J]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
QA [auth J]IPR002132Large ribosomal subunit protein uL5Family
PA [auth D]IPR057268Large ribosomal subunit protein uL18Family
PA [auth D]IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
PA [auth D]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
OA [auth z]IPR019434Domain of unknown function DUF2423Domain
NA [auth Z]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
NA [auth Z]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
NA [auth Z]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
NA [auth Z]IPR001141Large ribosomal subunit protein eL27Family
NA [auth Z]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
D [auth a]IPR021131Large ribosomal subunit protein uL15/eL18Domain
D [auth a]IPR030878Large ribosomal subunit protein uL15Family
D [auth a]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
D [auth a]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
MA [auth y]IPR002769Translation initiation factor IF6Family
LA [auth Y]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
LA [auth Y]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
LA [auth Y]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
LA [auth Y]IPR005824KOWDomain
LA [auth Y]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
LA [auth Y]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
KA [auth X]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
KA [auth X]IPR013025Large ribosomal subunit protein uL23-likeFamily
KA [auth X]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
KA [auth X]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
KA [auth X]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
JA [auth W]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
JA [auth W]IPR043164Large ribosomal subunit protein uL10-like, insertion domain superfamilyHomologous Superfamily
JA [auth W]IPR001790Large ribosomal subunit protein uL10, N-terminalDomain
JA [auth W]IPR051742Ribosomal Assembly Factor uL10Family
JA [auth W]IPR040637Large ribosomal subunit protein uL10-like, insertion domainDomain
JA [auth W]IPR033867Ribosome assembly factor Mrt4Family
IA [auth V]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
IA [auth V]IPR000218Large ribosomal subunit protein uL14Family
IA [auth V]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
HA [auth U]IPR002671Large ribosomal subunit protein eL22Family
HA [auth U]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
GA [auth T]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
GA [auth T]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
GA [auth T]IPR001147Large ribosomal subunit protein eL21Family
GA [auth T]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
FA [auth S]IPR028877Large ribosomal subunit protein eL20Family
FA [auth S]IPR023573Large ribosomal subunit protein eL20 domainDomain
FA [auth S]IPR021138Large ribosomal subunit protein eL20, eukaryotaFamily
EA [auth R]IPR039547Large ribosomal subunit protein eL19Family
EA [auth R]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
EA [auth R]IPR057260Ribosomal protein L19e, C-terminal domainDomain
EA [auth R]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
EA [auth R]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
EA [auth R]IPR057259Ribosomal protein L19e, N-terminal domainDomain
EA [auth R]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
EA [auth R]IPR000196Large ribosomal subunit protein eL19 domainDomain
DA [auth Q]IPR021131Large ribosomal subunit protein uL15/eL18Domain
DA [auth Q]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
DA [auth Q]IPR000039Large ribosomal subunit protein eL18Family
DA [auth Q]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
C [auth A]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
C [auth A]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
C [auth A]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
C [auth A]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
C [auth A]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth A]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
C [auth A]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
C [auth A]IPR002171Large ribosomal subunit protein uL2Family
CA [auth P]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
CA [auth P]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
CA [auth P]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
CA [auth P]IPR001063Large ribosomal subunit protein uL22Family
BA [auth O]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
BA [auth O]IPR005822Large ribosomal subunit protein uL13Family
BA [auth O]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
BA [auth O]IPR005755Large ribosomal subunit protein uL13, eukaryota/archaeaFamily
AA [auth u]IPR011017TRASH domainDomain
AA [auth u]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
AA [auth u]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
AA [auth u]IPR056366Large ribosomal subunit protein eL24Family
Z [auth N]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Z [auth N]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
Z [auth N]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
Z [auth N]IPR000439Large ribosomal subunit protein eL15Family
Y [auth p]IPR002674Large ribosomal subunit protein eL43Family
Y [auth p]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
Y [auth p]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
Y [auth p]IPR050522Eukaryotic ribosomal protein eL43Family
X [auth M]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
X [auth M]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
X [auth M]IPR039660Large ribosomal subunit protein eL14Family
X [auth M]IPR002784Large ribosomal subunit protein eL14 domainDomain
X [auth M]IPR005824KOWDomain
W [auth l]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
W [auth l]IPR000077Large ribosomal subunit protein eL39Family
W [auth l]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
V [auth L]IPR001380Large ribosomal subunit protein eL13Family
V [auth L]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
U [auth k]IPR002675Large ribosomal subunit protein eL38Family
U [auth k]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
T [auth j]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
T [auth j]IPR001569Large ribosomal subunit protein eL37Family
T [auth j]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
T [auth j]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
B [auth v]IPR007064Nmd3, N-terminalDomain
B [auth v]IPR04889960S ribosomal export protein NMD3, SH3 domainDomain
B [auth v]IPR04889860S ribosomal export protein NMD3, OB-fold domainDomain
B [auth v]IPR039768Ribosomal export protein Nmd3Family
S [auth i]IPR000509Large ribosomal subunit protein eL36Family
S [auth i]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
R [auth h]IPR001854Large ribosomal subunit protein uL29Family
R [auth h]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
R [auth h]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
R [auth h]IPR045059Large ribosomal subunit protein uL29, eukaryotaFamily
Q [auth H]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
Q [auth H]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
Q [auth H]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
Q [auth H]IPR000702Large ribosomal subunit protein uL6-likeFamily
P [auth I]IPR003604Matrin/U1-C-like, C2H2-type zinc fingerDomain
P [auth I]IPR051879C2H2-type Zinc Finger Maturation ProteinFamily
P [auth I]IPR013087Zinc finger C2H2-typeDomain
P [auth I]IPR036236Zinc finger C2H2 superfamilyHomologous Superfamily
P [auth I]IPR022755Zinc finger, double-stranded RNA bindingDomain
O [auth g]IPR008195Large ribosomal subunit protein eL34Family
O [auth g]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
O [auth g]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
N [auth G]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
N [auth G]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
N [auth G]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
N [auth G]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
N [auth G]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
N [auth G]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
M [auth f]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
M [auth f]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
M [auth f]IPR001780Large ribosomal subunit protein eL33Family
M [auth f]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
L [auth F]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
L [auth F]IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
L [auth F]IPR005998Large ribosomal subunit protein uL30, eukaryotaFamily
L [auth F]IPR039699Large ribosomal subunit protein uL30Family
L [auth F]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotaDomain
L [auth F]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
L [auth F]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
K [auth e]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
K [auth e]IPR001515Large ribosomal subunit protein eL32Family
K [auth e]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
J [auth E]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
J [auth E]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
J [auth E]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
J [auth E]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
J [auth E]IPR000915Large ribosomal subunit protein eL6Family