6NYV
Structure of spastin AAA domain in complex with a quinazoline-based inhibitor
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | d6nyvb_ | Alpha and beta proteins (a/b) | P-loop containing nucleoside triphosphate hydrolases | P-loop containing nucleoside triphosphate hydrolases | automated matches | automated matches | Fruit fly (Drosophila melanogaster ) [TaxId: 7227 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | Vps4_C_C | e6nyvB1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: Vps4_C_C | ECOD (1.6) |
A [auth B] | Sigma54_activat | e6nyvB2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B] | PF09336 | Vps4 C terminal oligomerisation domain (Vps4_C) | Vps4 C terminal oligomerisation domain | This domain is found at the C terminal of ATPase proteins involved in vacuolar sorting. It forms an alpha helix structure and is required for oligomerisation [1]. | Domain |
A [auth B] | PF17862 | AAA+ lid domain (AAA_lid_3) | AAA+ lid domain | This entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. | Domain |
A [auth B] | PF00004 | ATPase family associated with various cellular activities (AAA) (AAA) | ATPase family associated with various cellular activities (AAA) | AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B] | IPR017179 | Spastin | Family |
A [auth B] | IPR003593 | AAA+ ATPase domain | Domain |
A [auth B] | IPR003959 | ATPase, AAA-type, core | Domain |
A [auth B] | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |
A [auth B] | IPR007330 | MIT domain | Domain |
A [auth B] | IPR041569 | AAA ATPase, AAA+ lid domain | Domain |
A [auth B] | IPR015415 | Spastin/Vps4, C-terminal | Domain |
A [auth B] | IPR050304 | Microtubule-severing AAA ATPase | Family |
A [auth B] | IPR003960 | ATPase, AAA-type, conserved site | Conserved Site |