Annotations: 6O78


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AEUF08083e6o78A1 A: alpha bundlesX: CRISPR RNA silencing complex Cmr2 subunit second helical domain (From Topology)H: CRISPR RNA silencing complex Cmr2 subunit second helical domain (From Topology)T: CRISPR RNA silencing complex Cmr2 subunit second helical domainF: EUF08083ECOD (1.6)
AHDe6o78A4 A: alpha complex topologyX: PDEase-likeH: HD-domain/PDEase-like (From Topology)T: HD-domain/PDEase-likeF: HDECOD (1.6)
ACas10_III_2nde6o78A3 A: a+b two layersX: Alpha-beta plaitsH: Adenylyl and guanylyl cyclase catalytic domain-likeT: Adenylyl and guanylyl cyclase catalytic domain-likeF: Cas10_III_2ndECOD (1.6)
ACas10_III_1ste6o78A2 A: a+b two layersX: Alpha-beta plaitsH: Adenylyl and guanylyl cyclase catalytic domain-likeT: Adenylyl and guanylyl cyclase catalytic domain-likeF: Cas10_III_1stECOD (1.6)
AEUF08476e6o78A5 A: a+b two layersX: Csm1 ferredoxin-like domain (From Topology)H: Csm1 ferredoxin-like domain (From Topology)T: Csm1 ferredoxin-like domainF: EUF08476ECOD (1.6)
BUNK_F_TYPEe6o78B2 A: a+b two layersX: Alpha-beta plaitsH: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology)T: CRISPR transcript (pre-crRNA) processing endoribonuclease-relatedF: UNK_F_TYPEECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF22335Cas10/Cmr2, second palm domain (Cas10-Cmr2_palm2)Cas10/Cmr2, second palm domainThis entry represents the second palm domain of Cas10 subunit (named Csm1 in Type III-A and Cmr2 in III-B systems) from type III CRISPR-Cas systems [6]. This domain contains a conserved GGDD motif that is important for DNA polymerase activity [1-5]. ...Domain
PF01966HD domain (HD)HD domain- Family
PF18211Csm1 subunit domain B (Csm1_B)Csm1 subunit domain BThis domain is found in the Csm1 subunit of the Csm complex found in Thermococcus onnurineus. Csm is a type III-A CRISPR-Cas system, which is an RNA-guided immune defense mechanism that detects and destroys foreign DNA or RNA. This domain is known as ...Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A) -
Csm4 -
C [auth E]RNA (5'-D(*(ATP))-R(P*AP*A)-3')---