6OTR

Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth QB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8044010 3001397 SCOP2B (2022-06-29)
GB [auth XB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8044010 3001397 SCOP2B (2022-06-29)
C [auth QC]SCOP2B SuperfamilyRibosomal protein S3 C-terminal domain 8044012 3001053 SCOP2B (2022-06-29)
C [auth QC]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II) 8044011 3001043 SCOP2B (2022-06-29)
HB [auth XC]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II) 8044011 3001043 SCOP2B (2022-06-29)
HB [auth XC]SCOP2B SuperfamilyRibosomal protein S3 C-terminal domain 8044012 3001053 SCOP2B (2022-06-29)
D [auth QD]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8044014 3001473 SCOP2B (2022-06-29)
IB [auth XD]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8044014 3001473 SCOP2B (2022-06-29)
E [auth QE]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8044015 3000100 SCOP2B (2022-06-29)
E [auth QE]SCOP2B SuperfamilydsRNA-binding domain-like 8044017 3000985 SCOP2B (2022-06-29)
JB [auth XE]SCOP2B SuperfamilydsRNA-binding domain-like 8044017 3000985 SCOP2B (2022-06-29)
JB [auth XE]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8044015 3000100 SCOP2B (2022-06-29)
G [auth QG]SCOP2B SuperfamilyRibosomal protein S7 8033523 3000799 SCOP2B (2022-06-29)
LB [auth XG]SCOP2B SuperfamilyRibosomal protein S7 8033523 3000799 SCOP2B (2022-06-29)
I [auth QI]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8037678 3000100 SCOP2B (2022-06-29)
NB [auth XI]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8037678 3000100 SCOP2B (2022-06-29)
J [auth QJ]SCOP2B SuperfamilyRibosomal protein S10 8044019 3001336 SCOP2B (2022-06-29)
OB [auth XJ]SCOP2B SuperfamilyRibosomal protein S10 8044019 3001336 SCOP2B (2022-06-29)
K [auth QK]SCOP2B SuperfamilyTranslational machinery components 8044020 3000571 SCOP2B (2022-06-29)
PB [auth XK]SCOP2B SuperfamilyTranslational machinery components 8044020 3000571 SCOP2B (2022-06-29)
L [auth QL]SCOP2B SuperfamilyNucleic acid-binding proteins 8044021 3000135 SCOP2B (2022-06-29)
QB [auth XL]SCOP2B SuperfamilyNucleic acid-binding proteins 8044021 3000135 SCOP2B (2022-06-29)
M [auth QM]SCOP2B SuperfamilyS13-like H2TH domain 8003708 3000053 SCOP2B (2022-06-29)
RB [auth XM]SCOP2B SuperfamilyS13-like H2TH domain 8003708 3000053 SCOP2B (2022-06-29)
N [auth QN]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052585 3000068 SCOP2B (2022-06-29)
SB [auth XN]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052585 3000068 SCOP2B (2022-06-29)
P [auth QP]SCOP2B SuperfamilyRibosomal protein S16 8044025 3000680 SCOP2B (2022-06-29)
UB [auth XP]SCOP2B SuperfamilyRibosomal protein S16 8044025 3000680 SCOP2B (2022-06-29)
Q [auth QQ]SCOP2B SuperfamilyNucleic acid-binding proteins 8044026 3000135 SCOP2B (2022-06-29)
VB [auth XQ]SCOP2B SuperfamilyNucleic acid-binding proteins 8044026 3000135 SCOP2B (2022-06-29)
R [auth QR]SCOP2B SuperfamilyRibosomal protein S18 8044028 3001191 SCOP2B (2022-06-29)
WB [auth XR]SCOP2B SuperfamilyRibosomal protein S18 8044028 3001191 SCOP2B (2022-06-29)
S [auth QS]SCOP2B SuperfamilyRibosomal protein S19 8044027 3000686 SCOP2B (2022-06-29)
XB [auth XS]SCOP2B SuperfamilyRibosomal protein S19 8044027 3000686 SCOP2B (2022-06-29)
T [auth QT]SCOP2B SuperfamilyRibosomal protein S20 8044029 3001362 SCOP2B (2022-06-29)
YB [auth XT]SCOP2B SuperfamilyRibosomal protein S20 8044029 3001362 SCOP2B (2022-06-29)
DC [auth XY]SCOP2B SuperfamilyRelE-like 8097994 3000741 SCOP2B (2022-06-29)
EC [auth XZ]SCOP2B SuperfamilyRelE-like 8097994 3000741 SCOP2B (2022-06-29)
Y [auth QY]SCOP2B SuperfamilyRelE-like 8097994 3000741 SCOP2B (2022-06-29)
Z [auth QZ]SCOP2B SuperfamilyRelE-like 8097994 3000741 SCOP2B (2022-06-29)
AA [auth R0]SCOP2B SuperfamilyRibosomal L27 protein-like 8041210 3000539 SCOP2B (2022-06-29)
FC [auth Y0]SCOP2B SuperfamilyRibosomal L27 protein-like 8041210 3000539 SCOP2B (2022-06-29)
BA [auth R1]SCOP2B SuperfamilyL28p-like 8042932 3001966 SCOP2B (2022-06-29)
GC [auth Y1]SCOP2B SuperfamilyL28p-like 8042932 3001966 SCOP2B (2022-06-29)
CA [auth R2]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8042933 3000713 SCOP2B (2022-06-29)
HC [auth Y2]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8042933 3000713 SCOP2B (2022-06-29)
EA [auth R4]SCOP2B SuperfamilyL28p-like 8033189 3001966 SCOP2B (2022-06-29)
JC [auth Y4]SCOP2B SuperfamilyL28p-like 8033189 3001966 SCOP2B (2022-06-29)
FA [auth R5]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033190 3001320 SCOP2B (2022-06-29)
KC [auth Y5]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033190 3001320 SCOP2B (2022-06-29)
GA [auth R6]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033191 3001320 SCOP2B (2022-06-29)
LC [auth Y6]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033191 3001320 SCOP2B (2022-06-29)
IA [auth R8]SCOP2B SuperfamilyL35p-like 8033192 3000790 SCOP2B (2022-06-29)
NC [auth Y8]SCOP2B SuperfamilyL35p-like 8033192 3000790 SCOP2B (2022-06-29)
MA [auth RD]SCOP2B SuperfamilyNucleic acid-binding proteins 8033195 3000135 SCOP2B (2022-06-29)
MA [auth RD]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033194 3000334 SCOP2B (2022-06-29)
RC [auth YD]SCOP2B SuperfamilyNucleic acid-binding proteins 8033195 3000135 SCOP2B (2022-06-29)
RC [auth YD]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033194 3000334 SCOP2B (2022-06-29)
NA [auth RE]SCOP2B SuperfamilyTranslational proteins 8033197 3000811 SCOP2B (2022-06-29)
SC [auth YE]SCOP2B SuperfamilyTranslational proteins 8033197 3000811 SCOP2B (2022-06-29)
OA [auth RF]SCOP2B SuperfamilyRibosomal protein L4 8033198 3001146 SCOP2B (2022-06-29)
TC [auth YF]SCOP2B SuperfamilyRibosomal protein L4 8033198 3001146 SCOP2B (2022-06-29)
QA [auth RH]SCOP2B SuperfamilyRibosomal protein L6 8033203 3000724 SCOP2B (2022-06-29)
QA [auth RH]SCOP2B SuperfamilyRibosomal protein L6 8033202 3000724 SCOP2B (2022-06-29)
VC [auth YH]SCOP2B SuperfamilyRibosomal protein L6 8033202 3000724 SCOP2B (2022-06-29)
VC [auth YH]SCOP2B SuperfamilyRibosomal protein L6 8033203 3000724 SCOP2B (2022-06-29)
RA [auth RI]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8042934 3000329 SCOP2B (2022-06-29)
RA [auth RI]SCOP2B SuperfamilyL9 N-domain-like 8042935 3000338 SCOP2B (2022-06-29)
WC [auth YI]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8042934 3000329 SCOP2B (2022-06-29)
WC [auth YI]SCOP2B SuperfamilyL9 N-domain-like 8042935 3000338 SCOP2B (2022-06-29)
SA [auth RN]SCOP2B SuperfamilyRibosomal protein L13 8033205 3001134 SCOP2B (2022-06-29)
XC [auth YN]SCOP2B SuperfamilyRibosomal protein L13 8033205 3001134 SCOP2B (2022-06-29)
TA [auth RO]SCOP2B Superfamily50S Ribosomal protein L14-like 8042936 3000433 SCOP2B (2022-06-29)
YC [auth YO]SCOP2B Superfamily50S Ribosomal protein L14-like 8042936 3000433 SCOP2B (2022-06-29)
UA [auth RP]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8033207 3001045 SCOP2B (2022-06-29)
ZC [auth YP]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8033207 3001045 SCOP2B (2022-06-29)
AD [auth YQ]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8043627 3000884 SCOP2B (2022-06-29)
VA [auth RQ]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8043627 3000884 SCOP2B (2022-06-29)
BD [auth YR]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8032744 3000995 SCOP2B (2022-06-29)
WA [auth RR]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8032744 3000995 SCOP2B (2022-06-29)
CD [auth YS]SCOP2B SuperfamilyTranslational machinery components 8033211 3000571 SCOP2B (2022-06-29)
XA [auth RS]SCOP2B SuperfamilyTranslational machinery components 8033211 3000571 SCOP2B (2022-06-29)
DD [auth YT]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033214 3000334 SCOP2B (2022-06-29)
YA [auth RT]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033214 3000334 SCOP2B (2022-06-29)
ED [auth YU]SCOP2B SuperfamilyRibosomal protein L20 8033216 3000563 SCOP2B (2022-06-29)
ZA [auth RU]SCOP2B SuperfamilyRibosomal protein L20 8033216 3000563 SCOP2B (2022-06-29)
AB [auth RV]SCOP2B Superfamilyl21p-like 8033218 3002005 SCOP2B (2022-06-29)
FD [auth YV]SCOP2B Superfamilyl21p-like 8033218 3002005 SCOP2B (2022-06-29)
BB [auth RW]SCOP2B SuperfamilyRibosomal protein L22 8033220 3001078 SCOP2B (2022-06-29)
GD [auth YW]SCOP2B SuperfamilyRibosomal protein L22 8033220 3001078 SCOP2B (2022-06-29)
CB [auth RX]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8033219 3000210 SCOP2B (2022-06-29)
HD [auth YX]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8033219 3000210 SCOP2B (2022-06-29)
DB [auth RY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033223 3000334 SCOP2B (2022-06-29)
ID [auth YY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033223 3000334 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth QB]Ribosomal_S2e6otrQB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
GB [auth XB]Ribosomal_S2e6otrXB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
C [auth QC]Ribosomal_S3_Ce6otrQC1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
C [auth QC]KH_2_1e6otrQC2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
HB [auth XC]Ribosomal_S3_Ce6otrXC2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
HB [auth XC]KH_2_1e6otrXC1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
D [auth QD]S4e6otrQD1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
IB [auth XD]S4e6otrXD1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
E [auth QE]Ribosomal_S5_Ce6otrQE2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
E [auth QE]Ribosomal_S5e6otrQE1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
JB [auth XE]Ribosomal_S5_Ce6otrXE2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
JB [auth XE]Ribosomal_S5e6otrXE1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
F [auth QF]Ribosomal_S6e6otrQF1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
KB [auth XF]Ribosomal_S6e6otrXF1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
G [auth QG]Ribosomal_S7_1e6otrQG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
LB [auth XG]Ribosomal_S7_1e6otrXG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
H [auth QH]Ribosomal_S8_Ne6otrQH2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
H [auth QH]Ribosomal_S8_Ce6otrQH1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
MB [auth XH]Ribosomal_S8_Ne6otrXH1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
MB [auth XH]Ribosomal_S8_Ce6otrXH2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
I [auth QI]Ribosomal_S9e6otrQI1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
NB [auth XI]Ribosomal_S9e6otrXI1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
J [auth QJ]Ribosomal_S10e6otrQJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
OB [auth XJ]Ribosomal_S10e6otrXJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
K [auth QK]Ribosomal_S11e6otrQK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
PB [auth XK]Ribosomal_S11e6otrXK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
L [auth QL]Ribosom_S12_S23e6otrQL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
QB [auth XL]Ribosom_S12_S23e6otrXL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
M [auth QM]Ribosomal_S13_1e6otrQM1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
RB [auth XM]Ribosomal_S13_1e6otrXM1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
N [auth QN]Ribosomal_S14e6otrQN1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
SB [auth XN]Ribosomal_S14e6otrXN1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
O [auth QO]Ribosomal_S15_1e6otrQO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
TB [auth XO]Ribosomal_S15_1e6otrXO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
P [auth QP]Ribosomal_S16_1e6otrQP1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
UB [auth XP]Ribosomal_S16_1e6otrXP1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
Q [auth QQ]Ribosomal_S17_1e6otrQQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
VB [auth XQ]Ribosomal_S17_1e6otrXQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
R [auth QR]Ribosomal_S18e6otrQR1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
WB [auth XR]Ribosomal_S18e6otrXR1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
S [auth QS]Ribosomal_S19e6otrQS1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
XB [auth XS]Ribosomal_S19e6otrXS1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
T [auth QT]Ribosomal_S20pe6otrQT1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
YB [auth XT]Ribosomal_S20pe6otrXT1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
DC [auth XY]YoeB_toxine6otrXY1 A: a+b two layersX: RelE-likeH: RelE-like (From Topology)T: RelE-likeF: YoeB_toxinECOD (1.6)
EC [auth XZ]YoeB_toxine6otrXZ1 A: a+b two layersX: RelE-likeH: RelE-like (From Topology)T: RelE-likeF: YoeB_toxinECOD (1.6)
Y [auth QY]YoeB_toxine6otrQY1 A: a+b two layersX: RelE-likeH: RelE-like (From Topology)T: RelE-likeF: YoeB_toxinECOD (1.6)
Z [auth QZ]YoeB_toxine6otrQZ1 A: a+b two layersX: RelE-likeH: RelE-like (From Topology)T: RelE-likeF: YoeB_toxinECOD (1.6)
AA [auth R0]Ribosomal_L27e6otrR01 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
FC [auth Y0]Ribosomal_L27e6otrY01 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
BA [auth R1]Ribosomal_L28e6otrR11 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
GC [auth Y1]Ribosomal_L28e6otrY11 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
CA [auth R2]Ribosomal_L29e6otrR21 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
HC [auth Y2]Ribosomal_L29e6otrY21 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
DA [auth R3]Ribosomal_L30e6otrR31 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
IC [auth Y3]Ribosomal_L30e6otrY31 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
EA [auth R4]Ribosomal_L31e6otrR41 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
JC [auth Y4]Ribosomal_L31e6otrY41 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
FA [auth R5]Ribosomal_L32pe6otrR51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
KC [auth Y5]Ribosomal_L32pe6otrY51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
GA [auth R6]Ribosomal_L33e6otrR61 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
LC [auth Y6]Ribosomal_L33e6otrY61 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
HA [auth R7]Ribosomal_L34e6otrR71 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
MC [auth Y7]Ribosomal_L34e6otrY71 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
IA [auth R8]Ribosomal_L35pe6otrR81 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
NC [auth Y8]Ribosomal_L35pe6otrY81 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
JA [auth R9]Ribosomal_L36e6otrR91 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
OC [auth Y9]Ribosomal_L36e6otrY91 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
MA [auth RD]Ribosomal_L2_1e6otrRD2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
MA [auth RD]Ribosomal_L2_Ce6otrRD1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
RC [auth YD]Ribosomal_L2_1e6otrYD2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
RC [auth YD]Ribosomal_L2_Ce6otrYD1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
NA [auth RE]Ribosomal_L3e6otrRE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
SC [auth YE]Ribosomal_L3e6otrYE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
OA [auth RF]Ribosomal_L4e6otrRF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
TC [auth YF]Ribosomal_L4e6otrYF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
PA [auth RG]Ribosomal_L5_Ce6otrRG1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
UC [auth YG]Ribosomal_L5_Ce6otrYG1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
QA [auth RH]Ribosomal_L6e6otrRH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
QA [auth RH]Ribosomal_L6_1e6otrRH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
VC [auth YH]Ribosomal_L6e6otrYH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
VC [auth YH]Ribosomal_L6_1e6otrYH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
RA [auth RI]Ribosomal_L9_Ne6otrRI2 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
RA [auth RI]Ribosomal_L9_Ce6otrRI1 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_CECOD (1.6)
WC [auth YI]Ribosomal_L9_Ne6otrYI2 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
WC [auth YI]Ribosomal_L9_Ce6otrYI1 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_CECOD (1.6)
SA [auth RN]Ribosomal_L13e6otrRN1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
XC [auth YN]Ribosomal_L13e6otrYN1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
TA [auth RO]Ribosomal_L14e6otrRO1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
YC [auth YO]Ribosomal_L14e6otrYO1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
UA [auth RP]Ribosomal_L27Ae6otrRP1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
ZC [auth YP]Ribosomal_L27Ae6otrYP1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
AD [auth YQ]Ribosomal_L16e6otrYQ1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
VA [auth RQ]Ribosomal_L16e6otrRQ1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
BD [auth YR]Ribosomal_L17_1e6otrYR1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
WA [auth RR]Ribosomal_L17_1e6otrRR1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
CD [auth YS]Ribosomal_L18pe6otrYS1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
XA [auth RS]Ribosomal_L18pe6otrRS1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
DD [auth YT]Ribosomal_L19e6otrYT1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
YA [auth RT]Ribosomal_L19e6otrRT1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
ED [auth YU]Ribosomal_L20e6otrYU1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
ZA [auth RU]Ribosomal_L20e6otrRU1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
AB [auth RV]Ribosomal_L21pe6otrRV1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
FD [auth YV]Ribosomal_L21pe6otrYV1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
BB [auth RW]Ribosomal_L22e6otrRW1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
GD [auth YW]Ribosomal_L22e6otrYW1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
CB [auth RX]Ribosomal_L23_2e6otrRX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
HD [auth YX]Ribosomal_L23_2e6otrYX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
DB [auth RY]ribosomal_L24e6otrRY1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24ECOD (1.6)
ID [auth YY]ribosomal_L24e6otrYY1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24ECOD (1.6)
EB [auth RZ]Ribosomal_L25pe6otrRZ2 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
EB [auth RZ]Ribosomal_TL5_Ce6otrRZ1 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_CECOD (1.6)
JD [auth YZ]Ribosomal_L25pe6otrYZ1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
JD [auth YZ]Ribosomal_TL5_Ce6otrYZ2 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_CECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth QB],
GB [auth XB]
PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
C [auth QC],
HB [auth XC]
PF07650KH domain (KH_2)KH domain- Domain
C [auth QC],
HB [auth XC]
PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
D [auth QD],
IB [auth XD]
PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
D [auth QD],
IB [auth XD]
PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
E [auth QE],
JB [auth XE]
PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
E [auth QE],
JB [auth XE]
PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
F [auth QF],
KB [auth XF]
PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
H [auth QH],
MB [auth XH]
PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
I [auth QI],
NB [auth XI]
PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
J [auth QJ],
OB [auth XJ]
PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
K [auth QK],
PB [auth XK]
PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
L [auth QL],
QB [auth XL]
PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
M [auth QM],
RB [auth XM]
PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
N [auth QN],
SB [auth XN]
PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
O [auth QO],
TB [auth XO]
PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
P [auth QP],
UB [auth XP]
PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
Q [auth QQ],
VB [auth XQ]
PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
R [auth QR],
WB [auth XR]
PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
S [auth QS],
XB [auth XS]
PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
DC [auth XY],
EC [auth XZ],
Y [auth QY],
Z [auth QZ]
PF06769YoeB-like toxin of bacterial type II toxin-antitoxin system (YoeB_toxin)YoeB-like toxin of bacterial type II toxin-antitoxin systemYoeB_toxin is a family of bacterial toxins that forms one component of the type II toxin-antitoxin system in E. coli whose antitoxin is represented by YefM, found in Pfam:PF02604. The plasmid encoded Axe-Txe proteins in Enterococcus faecium act as a ...YoeB_toxin is a family of bacterial toxins that forms one component of the type II toxin-antitoxin system in E. coli whose antitoxin is represented by YefM, found in Pfam:PF02604. The plasmid encoded Axe-Txe proteins in Enterococcus faecium act as an antitoxin-toxin pair. When the plasmid is lost, the antitoxin is degraded relatively quickly by host enzymes. This allows the toxin to interact with its intracellular target, thus killing the cell or impeding cell growth [1]. These toxins are highly potent protein synthesis inhibitors, specifically blocking the initiation of translation. In the case of YoeB, it binds to the 50 S ribosomal subunit in 70 S ribosomes and interacts with the A site leading to mRNA cleavage at this site. As a result, the 3'-end portion of the mRNA is released from ribosomes, and translation initiation is effectively inhibited [2,3].
Domain
AA [auth R0],
FC [auth Y0]
PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
BA [auth R1],
GC [auth Y1]
PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
CA [auth R2],
HC [auth Y2]
PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
DA [auth R3],
IC [auth Y3]
PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
EA [auth R4],
JC [auth Y4]
PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
FA [auth R5],
KC [auth Y5]
PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
GA [auth R6],
LC [auth Y6]
PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
HA [auth R7],
MC [auth Y7]
PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
IA [auth R8],
NC [auth Y8]
PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
JA [auth R9],
OC [auth Y9]
PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
MA [auth RD],
RC [auth YD]
PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
MA [auth RD],
RC [auth YD]
PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
NA [auth RE],
SC [auth YE]
PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
OA [auth RF],
TC [auth YF]
PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
PA [auth RG],
UC [auth YG]
PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
PA [auth RG],
UC [auth YG]
PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
QA [auth RH],
VC [auth YH]
PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
RA [auth RI],
WC [auth YI]
PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
RA [auth RI],
WC [auth YI]
PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domain- Domain
SA [auth RN],
XC [auth YN]
PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
TA [auth RO],
YC [auth YO]
PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
UA [auth RP],
ZC [auth YP]
PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
AD [auth YQ],
VA [auth RQ]
PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
BD [auth YR],
WA [auth RR]
PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
DD [auth YT],
YA [auth RT]
PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
ED [auth YU],
ZA [auth RU]
PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
AB [auth RV],
FD [auth YV]
PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
BB [auth RW],
GD [auth YW]
PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
CB [auth RX],
HD [auth YX]
PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
DB [auth RY],
ID [auth YY]
PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
DB [auth RY],
ID [auth YY]
PF00467KOW motif (KOW)KOW motif- Family
EB [auth RZ],
JD [auth YZ]
PF14693Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C)Ribosomal protein TL5, C-terminal domainThis family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ...This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC proteins. TL5 or CTC are not found in Eukarya or Archaea. In some Bacteria, including E. coli, this ribosomal subunit occurs as a single domain protein (named Ribosomal subunit L25), where the only domain is homologous to TL5 N-terminal domain (hence included in family Pfam:PF01386). The function of the C-terminal domain of TLC is at present unknown.
Domain
EB [auth RZ],
JD [auth YZ]
PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth QA],
FB [auth XA]
16S rRNA---
B [auth QB],
GB [auth XB]
30S ribosomal protein S2
C [auth QC],
HB [auth XC]
30S ribosomal protein S3
D [auth QD],
IB [auth XD]
30S ribosomal protein S4
E [auth QE],
JB [auth XE]
30S ribosomal protein S5
F [auth QF],
KB [auth XF]
30S ribosomal protein S6
G [auth QG],
LB [auth XG]
30S ribosomal protein S7
H [auth QH],
MB [auth XH]
30S ribosomal protein S8
I [auth QI],
NB [auth XI]
30S ribosomal protein S9
J [auth QJ],
OB [auth XJ]
30S ribosomal protein S10
K [auth QK],
PB [auth XK]
30S ribosomal protein S11
L [auth QL],
QB [auth XL]
30S ribosomal protein S12
M [auth QM],
RB [auth XM]
30S ribosomal protein S13
N [auth QN],
SB [auth XN]
30S ribosomal protein S14 type Z
O [auth QO],
TB [auth XO]
30S ribosomal protein S15
P [auth QP],
UB [auth XP]
30S ribosomal protein S16
Q [auth QQ],
VB [auth XQ]
30S ribosomal protein S17
R [auth QR],
WB [auth XR]
30S ribosomal protein S18
S [auth QS],
XB [auth XS]
30S ribosomal protein S19
T [auth QT],
YB [auth XT]
30S ribosomal protein S20
U [auth QU],
ZB [auth XU]
30S ribosomal protein Thx -
AC [auth XV],
BC [auth XW],
V [auth QV],
W [auth QW]
tRNA-fMet---
CC [auth XX],
X [auth QX]
mRNA---
DC [auth XY],
EC [auth XZ],
Y [auth QY],
Z [auth QZ]
Addiction module toxin, Txe/YoeB family -
AA [auth R0],
FC [auth Y0]
50S ribosomal protein L27
BA [auth R1],
GC [auth Y1]
50S ribosomal protein L28
CA [auth R2],
HC [auth Y2]
50S ribosomal protein L29
DA [auth R3],
IC [auth Y3]
50S ribosomal protein L30
EA [auth R4],
JC [auth Y4]
50S ribosomal protein L31
FA [auth R5],
KC [auth Y5]
50S ribosomal protein L32
GA [auth R6],
LC [auth Y6]
50S ribosomal protein L33
HA [auth R7],
MC [auth Y7]
50S ribosomal protein L34
IA [auth R8],
NC [auth Y8]
50S ribosomal protein L35
JA [auth R9],
OC [auth Y9]
50S ribosomal protein L36
KA [auth RA],
PC [auth YA]
23S rRNA---
LA [auth RB],
QC [auth YB]
5S rRNA---
MA [auth RD],
RC [auth YD]
50S ribosomal protein L2
NA [auth RE],
SC [auth YE]
50S ribosomal protein L3
OA [auth RF],
TC [auth YF]
50S ribosomal protein L4
PA [auth RG],
UC [auth YG]
50S ribosomal protein L5
QA [auth RH],
VC [auth YH]
50S ribosomal protein L6
RA [auth RI],
WC [auth YI]
50S ribosomal protein L9
SA [auth RN],
XC [auth YN]
50S ribosomal protein L13
TA [auth RO],
YC [auth YO]
50S ribosomal protein L14
UA [auth RP],
ZC [auth YP]
50S ribosomal protein L15
AD [auth YQ],
VA [auth RQ]
50S ribosomal protein L16
BD [auth YR],
WA [auth RR]
50S ribosomal protein L17
CD [auth YS],
XA [auth RS]
50S ribosomal protein L18
DD [auth YT],
YA [auth RT]
50S ribosomal protein L19
ED [auth YU],
ZA [auth RU]
50S ribosomal protein L20
AB [auth RV],
FD [auth YV]
50S ribosomal protein L21
BB [auth RW],
GD [auth YW]
50S ribosomal protein L22
CB [auth RX],
HD [auth YX]
50S ribosomal protein L23
DB [auth RY],
ID [auth YY]
50S ribosomal protein L24
EB [auth RZ],
JD [auth YZ]
50S ribosomal protein L25
KD [auth ZA],
LD [auth ZB]
CCPuro---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth QB],
GB [auth XB]
IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
B [auth QB],
GB [auth XB]
IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
B [auth QB],
GB [auth XB]
IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
B [auth QB],
GB [auth XB]
IPR001865Small ribosomal subunit protein uS2Family
C [auth QC],
HB [auth XC]
IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
C [auth QC],
HB [auth XC]
IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
C [auth QC],
HB [auth XC]
IPR004087K Homology domainDomain
C [auth QC],
HB [auth XC]
IPR004044K Homology domain, type 2Domain
C [auth QC],
HB [auth XC]
IPR015946K homology domain-like, alpha/betaHomologous Superfamily
C [auth QC],
HB [auth XC]
IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
C [auth QC],
HB [auth XC]
IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
C [auth QC],
HB [auth XC]
IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
D [auth QD],
IB [auth XD]
IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
D [auth QD],
IB [auth XD]
IPR002942RNA-binding S4 domainDomain
D [auth QD],
IB [auth XD]
IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
D [auth QD],
IB [auth XD]
IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
D [auth QD],
IB [auth XD]
IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
D [auth QD],
IB [auth XD]
IPR022801Small ribosomal subunit protein uS4Family
E [auth QE],
JB [auth XE]
IPR000851Small ribosomal subunit protein uS5Family
E [auth QE],
JB [auth XE]
IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
E [auth QE],
JB [auth XE]
IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
E [auth QE],
JB [auth XE]
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
E [auth QE],
JB [auth XE]
IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
E [auth QE],
JB [auth XE]
IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
E [auth QE],
JB [auth XE]
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
F [auth QF],
KB [auth XF]
IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
F [auth QF],
KB [auth XF]
IPR000529Small ribosomal subunit protein bS6Family
F [auth QF],
KB [auth XF]
IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
F [auth QF],
KB [auth XF]
IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
F [auth QF],
KB [auth XF]
IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
G [auth QG],
LB [auth XG]
IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
G [auth QG],
LB [auth XG]
IPR000235Small ribosomal subunit protein uS7Family
G [auth QG],
LB [auth XG]
IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
G [auth QG],
LB [auth XG]
IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
G [auth QG],
LB [auth XG]
IPR023798Small ribosomal subunit protein uS7 domainDomain
H [auth QH],
MB [auth XH]
IPR000630Small ribosomal subunit protein uS8Family
H [auth QH],
MB [auth XH]
IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
H [auth QH],
MB [auth XH]
IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
I [auth QI],
NB [auth XI]
IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
I [auth QI],
NB [auth XI]
IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
I [auth QI],
NB [auth XI]
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
I [auth QI],
NB [auth XI]
IPR000754Small ribosomal subunit protein uS9Family
I [auth QI],
NB [auth XI]
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
J [auth QJ],
OB [auth XJ]
IPR001848Small ribosomal subunit protein uS10Family
J [auth QJ],
OB [auth XJ]
IPR027486Small ribosomal subunit protein uS10 domainDomain
J [auth QJ],
OB [auth XJ]
IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
J [auth QJ],
OB [auth XJ]
IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
K [auth QK],
PB [auth XK]
IPR001971Small ribosomal subunit protein uS11Family
K [auth QK],
PB [auth XK]
IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
K [auth QK],
PB [auth XK]
IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
K [auth QK],
PB [auth XK]
IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
L [auth QL],
QB [auth XL]
IPR006032Small ribosomal subunit protein uS12Family
L [auth QL],
QB [auth XL]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
L [auth QL],
QB [auth XL]
IPR005679Ribosomal protein uS12, bacterial-typeFamily
M [auth QM],
RB [auth XM]
IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
M [auth QM],
RB [auth XM]
IPR001892Small ribosomal subunit protein uS13Family
M [auth QM],
RB [auth XM]
IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
M [auth QM],
RB [auth XM]
IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
M [auth QM],
RB [auth XM]
IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
N [auth QN],
SB [auth XN]
IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
N [auth QN],
SB [auth XN]
IPR001209Small ribosomal subunit protein uS14Family
N [auth QN],
SB [auth XN]
IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
N [auth QN],
SB [auth XN]
IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
O [auth QO],
TB [auth XO]
IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
O [auth QO],
TB [auth XO]
IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
O [auth QO],
TB [auth XO]
IPR000589Small ribosomal subunit protein uS15Family
P [auth QP],
UB [auth XP]
IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
P [auth QP],
UB [auth XP]
IPR000307Small ribosomal subunit protein bS16Family
Q [auth QQ],
VB [auth XQ]
IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
Q [auth QQ],
VB [auth XQ]
IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
Q [auth QQ],
VB [auth XQ]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Q [auth QQ],
VB [auth XQ]
IPR000266Small ribosomal subunit protein uS17Family
R [auth QR],
WB [auth XR]
IPR001648Small ribosomal subunit protein bS18Family
R [auth QR],
WB [auth XR]
IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
R [auth QR],
WB [auth XR]
IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
S [auth QS],
XB [auth XS]
IPR002222Small ribosomal subunit protein uS19Family
S [auth QS],
XB [auth XS]
IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
S [auth QS],
XB [auth XS]
IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
S [auth QS],
XB [auth XS]
IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
T [auth QT],
YB [auth XT]
IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
T [auth QT],
YB [auth XT]
IPR002583Small ribosomal subunit protein bS20Family
U [auth QU],
ZB [auth XU]
IPR030826Small ribosomal subunit protein bTHX/bTHXc/bTHXmFamily
U [auth QU],
ZB [auth XU]
IPR031414Small ribosomal subunit protein bTHXFamily
DC [auth XY],
EC [auth XZ],
Y [auth QY],
Z [auth QZ]
IPR009614Toxin YoeBFamily
DC [auth XY],
EC [auth XZ],
Y [auth QY],
Z [auth QZ]
IPR035093Toxin-antitoxin system, RelE/ParE toxin domain superfamilyHomologous Superfamily
AA [auth R0],
FC [auth Y0]
IPR001684Large ribosomal subunit protein bL27Family
AA [auth R0],
FC [auth Y0]
IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
BA [auth R1],
GC [auth Y1]
IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
BA [auth R1],
GC [auth Y1]
IPR050096Bacterial ribosomal protein bL28Family
BA [auth R1],
GC [auth Y1]
IPR026569Large ribosomal subunit protein bL28Family
BA [auth R1],
GC [auth Y1]
IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
CA [auth R2],
HC [auth Y2]
IPR050063Universal ribosomal protein uL29Family
CA [auth R2],
HC [auth Y2]
IPR001854Large ribosomal subunit protein uL29Family
CA [auth R2],
HC [auth Y2]
IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
CA [auth R2],
HC [auth Y2]
IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
DA [auth R3],
IC [auth Y3]
IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
DA [auth R3],
IC [auth Y3]
IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
DA [auth R3],
IC [auth Y3]
IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
DA [auth R3],
IC [auth Y3]
IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
EA [auth R4],
JC [auth Y4]
IPR002150Large ribosomal subunit protein bL31 type A/BFamily
EA [auth R4],
JC [auth Y4]
IPR027491Large ribosomal subunit protein bL31 type AFamily
EA [auth R4],
JC [auth Y4]
IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
EA [auth R4],
JC [auth Y4]
IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
FA [auth R5],
KC [auth Y5]
IPR002677Large ribosomal subunit protein bL32Family
FA [auth R5],
KC [auth Y5]
IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
FA [auth R5],
KC [auth Y5]
IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
GA [auth R6],
LC [auth Y6]
IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
GA [auth R6],
LC [auth Y6]
IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
GA [auth R6],
LC [auth Y6]
IPR001705Large ribosomal subunit protein bL33Family
GA [auth R6],
LC [auth Y6]
IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
HA [auth R7],
MC [auth Y7]
IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
HA [auth R7],
MC [auth Y7]
IPR000271Large ribosomal subunit protein bL34Family
IA [auth R8],
NC [auth Y8]
IPR021137Large ribosomal subunit protein bL35-likeFamily
IA [auth R8],
NC [auth Y8]
IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
IA [auth R8],
NC [auth Y8]
IPR001706Large ribosomal subunit protein bL35Family
IA [auth R8],
NC [auth Y8]
IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
JA [auth R9],
OC [auth Y9]
IPR000473Large ribosomal subunit protein bL36Family
JA [auth R9],
OC [auth Y9]
IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
MA [auth RD],
RC [auth YD]
IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
MA [auth RD],
RC [auth YD]
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
MA [auth RD],
RC [auth YD]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
MA [auth RD],
RC [auth YD]
IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
MA [auth RD],
RC [auth YD]
IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
MA [auth RD],
RC [auth YD]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
MA [auth RD],
RC [auth YD]
IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
MA [auth RD],
RC [auth YD]
IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
MA [auth RD],
RC [auth YD]
IPR002171Large ribosomal subunit protein uL2Family
NA [auth RE],
SC [auth YE]
IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
NA [auth RE],
SC [auth YE]
IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
NA [auth RE],
SC [auth YE]
IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
NA [auth RE],
SC [auth YE]
IPR000597Large ribosomal subunit protein uL3Family
OA [auth RF],
TC [auth YF]
IPR013005Large ribosomal subunit protein uL4-likeFamily
OA [auth RF],
TC [auth YF]
IPR002136Large ribosomal subunit protein uL4Family
OA [auth RF],
TC [auth YF]
IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
PA [auth RG],
UC [auth YG]
IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
PA [auth RG],
UC [auth YG]
IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
PA [auth RG],
UC [auth YG]
IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
PA [auth RG],
UC [auth YG]
IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
PA [auth RG],
UC [auth YG]
IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
PA [auth RG],
UC [auth YG]
IPR002132Large ribosomal subunit protein uL5Family
QA [auth RH],
VC [auth YH]
IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
QA [auth RH],
VC [auth YH]
IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
QA [auth RH],
VC [auth YH]
IPR000702Large ribosomal subunit protein uL6-likeFamily
QA [auth RH],
VC [auth YH]
IPR019906Large ribosomal subunit protein uL6, bacterial-typeFamily
RA [auth RI],
WC [auth YI]
IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
RA [auth RI],
WC [auth YI]
IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
RA [auth RI],
WC [auth YI]
IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
RA [auth RI],
WC [auth YI]
IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
RA [auth RI],
WC [auth YI]
IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
RA [auth RI],
WC [auth YI]
IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
RA [auth RI],
WC [auth YI]
IPR000244Large ribosomal subunit protein bL9Family
SA [auth RN],
XC [auth YN]
IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
SA [auth RN],
XC [auth YN]
IPR005822Large ribosomal subunit protein uL13Family
SA [auth RN],
XC [auth YN]
IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
SA [auth RN],
XC [auth YN]
IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
TA [auth RO],
YC [auth YO]
IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
TA [auth RO],
YC [auth YO]
IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
TA [auth RO],
YC [auth YO]
IPR000218Large ribosomal subunit protein uL14Family
TA [auth RO],
YC [auth YO]
IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
UA [auth RP],
ZC [auth YP]
IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
UA [auth RP],
ZC [auth YP]
IPR021131Large ribosomal subunit protein uL15/eL18Domain
UA [auth RP],
ZC [auth YP]
IPR030878Large ribosomal subunit protein uL15Family
UA [auth RP],
ZC [auth YP]
IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
UA [auth RP],
ZC [auth YP]
IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
AD [auth YQ],
VA [auth RQ]
IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
AD [auth YQ],
VA [auth RQ]
IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
AD [auth YQ],
VA [auth RQ]
IPR016180Large ribosomal subunit protein uL16 domainDomain
AD [auth YQ],
VA [auth RQ]
IPR047873Large ribosomal subunit protein uL16Family
BD [auth YR],
WA [auth RR]
IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
BD [auth YR],
WA [auth RR]
IPR000456Large ribosomal subunit protein bL17Family
CD [auth YS],
XA [auth RS]
IPR005484Large ribosomal subunit protein uL18Family
CD [auth YS],
XA [auth RS]
IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
DD [auth YT],
YA [auth RT]
IPR001857Large ribosomal subunit protein bL19Family
DD [auth YT],
YA [auth RT]
IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
DD [auth YT],
YA [auth RT]
IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
DD [auth YT],
YA [auth RT]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
ED [auth YU],
ZA [auth RU]
IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
ED [auth YU],
ZA [auth RU]
IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
ED [auth YU],
ZA [auth RU]
IPR005813Large ribosomal subunit protein bL20Family
AB [auth RV],
FD [auth YV]
IPR028909Large ribosomal subunit protein bL21-likeFamily
AB [auth RV],
FD [auth YV]
IPR001787Large ribosomal subunit protein bL21Family
AB [auth RV],
FD [auth YV]
IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
BB [auth RW],
GD [auth YW]
IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
BB [auth RW],
GD [auth YW]
IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
BB [auth RW],
GD [auth YW]
IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
BB [auth RW],
GD [auth YW]
IPR001063Large ribosomal subunit protein uL22Family
BB [auth RW],
GD [auth YW]
IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
CB [auth RX],
HD [auth YX]
IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
CB [auth RX],
HD [auth YX]
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
CB [auth RX],
HD [auth YX]
IPR013025Large ribosomal subunit protein uL23-likeFamily
DB [auth RY],
ID [auth YY]
IPR003256Large ribosomal subunit protein uL24Family
DB [auth RY],
ID [auth YY]
IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
DB [auth RY],
ID [auth YY]
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
DB [auth RY],
ID [auth YY]
IPR005824KOWDomain
DB [auth RY],
ID [auth YY]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
DB [auth RY],
ID [auth YY]
IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
EB [auth RZ],
JD [auth YZ]
IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
EB [auth RZ],
JD [auth YZ]
IPR001021Ribosomal protein bL25, long-formFamily
EB [auth RZ],
JD [auth YZ]
IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
EB [auth RZ],
JD [auth YZ]
IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
EB [auth RZ],
JD [auth YZ]
IPR020057Large ribosomal subunit protein bL25, beta domainDomain
EB [auth RZ],
JD [auth YZ]
IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
EB [auth RZ],
JD [auth YZ]
IPR050070Bacterial ribosomal protein bL25Family