6SD0 | pdb_00006sd0

Structure of beta-galactosidase from Thermotoga maritima.


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DFlu_NPe6sd0D1 A: alpha bundlesX: P-loop domains-likeH: Helical bundle in flu nucleocapsid proteinT: Helical bundle in flu nucleocapsid proteinF: Flu_NPECOD (develop294)
CbZIP_1e6sd0C1 A: alpha bundlesX: P-loop domains-likeH: Helical bundle in flu nucleocapsid proteinT: Helical bundle in flu nucleocapsid proteinF: bZIP_1ECOD (develop294)
BbZIP_1e6sd0B1 A: alpha bundlesX: P-loop domains-likeH: Helical bundle in flu nucleocapsid proteinT: Helical bundle in flu nucleocapsid proteinF: bZIP_1ECOD (develop294)
AbZIP_1e6sd0A1 A: alpha bundlesX: P-loop domains-likeH: Helical bundle in flu nucleocapsid proteinT: Helical bundle in flu nucleocapsid proteinF: bZIP_1ECOD (develop294)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF02836Glycosyl hydrolases family 2, TIM barrel domain (Glyco_hydro_2_C)Glycosyl hydrolases family 2, TIM barrel domainThis family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. Domain
A, B, C, D
PF00703Glycosyl hydrolases family 2 (Glyco_hydro_2)Glycosyl hydrolases family 2This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. Domain
A, B, C, D
PF02837Glycosyl hydrolases family 2, sugar binding domain (Glyco_hydro_2_N)Glycosyl hydrolases family 2, sugar binding domainThis family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction. Domain
A, B, C, D
PF16353Beta-galactosidase, domain 4 (LacZ_4)Beta-galactosidase, domain 4This entry represents domain 4 found in beta-galactosidase [1] and it is organised in a jelly-roll type barrel (Rutkiewicz-Krotewicz M. et al. Crystals 2018, 8(1), 13, https://doi.org/10.3390/cryst8010013). Domain
A, B, C, D
PF02929Beta galactosidase small chain (Bgal_small_N)Beta galactosidase small chainThis domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase. Domain