6SKG | pdb_00006skg

Cryo-EM Structure of T. kodakarensis 70S ribosome in TkNat10 deleted strain

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
I [auth Ai]SCOP2 FamilyRibosomal protein S7 8099619 4001112 SCOP2 (2022-06-29)
I [auth Ai]SCOP2 SuperfamilyRibosomal protein S7 8099620 3000799 SCOP2 (2022-06-29)
H [auth Ah]SCOP2B SuperfamilyGS N-terminal domain-like 8099616 3000408 SCOP2B (2022-06-29)
LB [auth Bl]SCOP2B SuperfamilyZn-binding ribosomal proteins 8099626 3001320 SCOP2B (2022-06-29)
IB [auth Bi]SCOP2B SuperfamilyRibosomal protein L39e 8099644 3001756 SCOP2B (2022-06-29)
HB [auth Bh]SCOP2B SuperfamilyZn-binding ribosomal proteins 8099650 3001320 SCOP2B (2022-06-29)
GB [auth Bg]SCOP2B SuperfamilyZn-binding ribosomal proteins 8099618 3001320 SCOP2B (2022-06-29)
EB [auth Be]SCOP2B SuperfamilyRibosomal protein L34e-like 8099668 3002203 SCOP2B (2022-06-29)
DB [auth Bd]SCOP2B SuperfamilyRibosomal protein L32e 8099680 3000982 SCOP2B (2022-06-29)
CB [auth Bc]SCOP2B SuperfamilyRibosomal protein L31e 8099642 3000699 SCOP2B (2022-06-29)
BB [auth Bb]SCOP2B SuperfamilyL30e-like 8099622 3001739 SCOP2B (2022-06-29)
AB [auth Ba]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8099686 3001378 SCOP2B (2022-06-29)
ZA [auth BZ]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8099608 3000713 SCOP2B (2022-06-29)
XA [auth BX]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8099672 3000334 SCOP2B (2022-06-29)
WA [auth BW]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8099604 3000210 SCOP2B (2022-06-29)
VA [auth BV]SCOP2B SuperfamilyRibosomal protein L22 8099606 3001078 SCOP2B (2022-06-29)
UA [auth BU]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8099648 3000334 SCOP2B (2022-06-29)
TA [auth BT]SCOP2B SuperfamilyRplX-like 8099640 3000673 SCOP2B (2022-06-29)
SA [auth BS]SCOP2B SuperfamilyRibosomal protein L19 (L19e) 8099682 3000890 SCOP2B (2022-06-29)
RA [auth BR]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8099664 3001045 SCOP2B (2022-06-29)
QA [auth BQ]SCOP2B SuperfamilyTranslational machinery components 8099684 3000571 SCOP2B (2022-06-29)
PA [auth BP]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8099646 3000210 SCOP2B (2022-06-29)
D [auth Ad]SCOP2B SuperfamilyRibosomal S3Ae-like 8099632 3002166 SCOP2B (2022-06-29)
OA [auth BO]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8099688 3001045 SCOP2B (2022-06-29)
NA [auth BN]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8099658 3000334 SCOP2B (2022-06-29)
MA [auth BM]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8099658 3000334 SCOP2B (2022-06-29)
LA [auth BL]SCOP2B Superfamily50S Ribosomal protein L14-like 8099670 3000433 SCOP2B (2022-06-29)
KA [auth BK]SCOP2B SuperfamilyRibosomal protein L13 8099666 3001134 SCOP2B (2022-06-29)
JA [auth BJ]SCOP2 FamilyRibosomal protein L10e 8099611 4001135 SCOP2 (2022-06-29)
JA [auth BJ]SCOP2 SuperfamilyRibosomal protein L16p/L10e 8099612 3000884 SCOP2 (2022-06-29)
IA [auth BI]SCOP2B SuperfamilyL30e-like 8099636 3001739 SCOP2B (2022-06-29)
HA [auth BH]SCOP2B SuperfamilyL30e-like 8099636 3001739 SCOP2B (2022-06-29)
FA [auth BF]SCOP2B SuperfamilyRL5-like 8099674 3001709 SCOP2B (2022-06-29)
EA [auth BE]SCOP2B SuperfamilyRibosomal protein L4 8099610 3001146 SCOP2B (2022-06-29)
DA [auth BD]SCOP2B SuperfamilyTranslational proteins 8099614 3000811 SCOP2B (2022-06-29)
Y [auth Ay]SCOP2B SuperfamilyNucleic acid-binding proteins 8099638 3000135 SCOP2B (2022-06-29)
X [auth Ax]SCOP2B SuperfamilyZn-binding ribosomal proteins 8099624 3001320 SCOP2B (2022-06-29)
W [auth Aw]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8099652 3000210 SCOP2B (2022-06-29)
NB [auth Bn]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8099652 3000210 SCOP2B (2022-06-29)
V [auth Av]SCOP2B SuperfamilyWinged helix DNA-binding domain 8099634 3000034 SCOP2B (2022-06-29)
T [auth At]SCOP2B SuperfamilyRps17e-like 8099602 3001852 SCOP2B (2022-06-29)
MB [auth Bm]SCOP2B SuperfamilyRps17e-like 8099602 3001852 SCOP2B (2022-06-29)
B [auth Ab]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8099654 3001397 SCOP2B (2022-06-29)
R [auth Ar]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8099676 3000068 SCOP2B (2022-06-29)
P [auth Ap]SCOP2B SuperfamilyS13-like H2TH domain 8099660 3000053 SCOP2B (2022-06-29)
N [auth An]SCOP2B SuperfamilyTranslational machinery components 8099662 3000571 SCOP2B (2022-06-29)
M [auth Am]SCOP2B SuperfamilyRibosomal protein S10 8099628 3001336 SCOP2B (2022-06-29)
L [auth Al]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8099656 3000100 SCOP2B (2022-06-29)
K [auth Ak]SCOP2B Superfamily50S Ribosomal protein L14-like 8099630 3000433 SCOP2B (2022-06-29)
J [auth Aj]SCOP2B SuperfamilyRibosomal protein S8 8099678 3000709 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth Ai]Glyco_hydro_42e6skgAi1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
H [auth Ah]Glyco_hydro_42e6skgAh1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
PB [auth Bp]CSDe6skgBp1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: CSDECOD (develop294)
OB [auth Bo]CSDe6skgBo1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: CSDECOD (develop294)
LB [auth Bl]Glyco_hydro_42e6skgBl1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
KB [auth Bk]Glyco_hydro_42e6skgBk1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
JB [auth Bj]Glyco_hydro_42e6skgBj1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
F [auth Af]CSDe6skgAf1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: CSDECOD (develop294)
IB [auth Bi]Glyco_hydro_42e6skgBi1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
HB [auth Bh]Glyco_hydro_42e6skgBh1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
GB [auth Bg]Glyco_hydro_42e6skgBg1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
FB [auth Bf]CSDe6skgBf1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: CSDECOD (develop294)
EB [auth Be]Glyco_hydro_42e6skgBe1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
DB [auth Bd]Glyco_hydro_42e6skgBd1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
CB [auth Bc]Glyco_hydro_42e6skgBc1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
BB [auth Bb]Glyco_hydro_42e6skgBb1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
AB [auth Ba]Glyco_hydro_42e6skgBa1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
ZA [auth BZ]Glyco_hydro_42e6skgBZ1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
E [auth Ae]Glyco_hydro_42e6skgAe1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
YA [auth BY]Glyco_hydro_42e6skgBY1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
XA [auth BX]Glyco_hydro_42e6skgBX1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
WA [auth BW]Glyco_hydro_42e6skgBW1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
VA [auth BV]Glyco_hydro_42e6skgBV1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
UA [auth BU]Glyco_hydro_42e6skgBU1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
TA [auth BT]Glyco_hydro_42e6skgBT1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
SA [auth BS]Glyco_hydro_42e6skgBS1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
RA [auth BR]Glyco_hydro_42e6skgBR1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
QA [auth BQ]Glyco_hydro_42e6skgBQ1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
PA [auth BP]Glyco_hydro_42e6skgBP1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
D [auth Ad]Glyco_hydro_42e6skgAd1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
OA [auth BO]Glyco_hydro_42e6skgBO1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
NA [auth BN]Glyco_hydro_42e6skgBN1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
MA [auth BM]Glyco_hydro_42e6skgBM1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
LA [auth BL]Glyco_hydro_42e6skgBL1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
KA [auth BK]Glyco_hydro_42e6skgBK1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
JA [auth BJ]Glyco_hydro_42e6skgBJ1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
IA [auth BI]Glyco_hydro_42e6skgBI1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
HA [auth BH]Glyco_hydro_42e6skgBH1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
GA [auth BG]Glyco_hydro_42e6skgBG1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
FA [auth BF]Glyco_hydro_42e6skgBF1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
EA [auth BE]Glyco_hydro_42e6skgBE1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
DA [auth BD]Glyco_hydro_42e6skgBD1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
C [auth Ac]Glyco_hydro_42e6skgAc1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
CA [auth BC]Glyco_hydro_42e6skgBC1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
Z [auth Az]Glyco_hydro_42e6skgAz1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
Y [auth Ay]Glyco_hydro_42e6skgAy1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
X [auth Ax]Glyco_hydro_42e6skgAx1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
W [auth Aw]Glyco_hydro_42e6skgAw1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
NB [auth Bn]Glyco_hydro_42e6skgBn1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
V [auth Av]Glyco_hydro_42e6skgAv1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
U [auth Au]Glyco_hydro_42e6skgAu1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
T [auth At]Glyco_hydro_42e6skgAt1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
MB [auth Bm]Glyco_hydro_42e6skgBm1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
B [auth Ab]Glyco_hydro_42e6skgAb1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
S [auth As]Glyco_hydro_42e6skgAs1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
R [auth Ar]Glyco_hydro_42e6skgAr1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
Q [auth Aq]Glyco_hydro_42e6skgAq1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
P [auth Ap]Glyco_hydro_42e6skgAp1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
O [auth Ao]Glyco_hydro_42e6skgAo1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
N [auth An]Glyco_hydro_42e6skgAn1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
M [auth Am]Glyco_hydro_42e6skgAm1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
L [auth Al]Glyco_hydro_42e6skgAl1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
K [auth Ak]Glyco_hydro_42e6skgAk1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)
J [auth Aj]Glyco_hydro_42e6skgAj1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_hydro_42ECOD (develop294)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
ZA [auth BZ]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
YA [auth BY]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24eDomain
XA [auth BX]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
XA [auth BX]PF00467KOW motif (KOW)KOW motif- Family
WA [auth BW]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
VA [auth BV]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
UA [auth BU]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
TA [auth BT]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A. Domain
SA [auth BS]PF01280Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e)Ribosomal protein L19e, N-terminal domainThis domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
SA [auth BS]PF25476Ribosomal protein L19e, C-terminal domain (Ribosomal_L19e_C)Ribosomal protein L19e, C-terminal domainThis domain is found at the C-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
RA [auth BR]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
QA [auth BQ]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
PA [auth BP]PF09377SBDS protein, domain II (SBDS_domain_II)SBDS protein, domain IIMembers containing this domain are highly conserved in species ranging from archaea to vertebrates and plants [1], including several Shwachman-Bodian-Diamond syndrome (SBDS) proteins from both mouse and humans. Shwachman-Diamond syndrome is an autoso ...Members containing this domain are highly conserved in species ranging from archaea to vertebrates and plants [1], including several Shwachman-Bodian-Diamond syndrome (SBDS) proteins from both mouse and humans. Shwachman-Diamond syndrome is an autosomal recessive disorder with clinical features that include pancreatic exocrine insufficiency, haematological dysfunction and skeletal abnormalities. These proteins play a role in RNA metabolism [2,3]. In yeast Sdo1 is involved in the biogenesis of the 60S ribosomal subunit and translational activation of ribosomes [4]. SBDS protein is composed of three domains. The N-terminal (Pfam:PF01172) (FYSH) domain (domain I) is the most frequent target for disease mutations and contains a novel mixed alpha/beta-fold, the central domain (domain II) represented in this entry consists of a three-helical bundle and the C-terminal domain that has a ferredoxin-like fold [3,5].
Domain
PA [auth BP]PF01172Shwachman-Bodian-Diamond syndrome (SBDS) N-terminal domain (SBDS_N)Shwachman-Bodian-Diamond syndrome (SBDS) N-terminal domainThis entry represents the N-terminal domain of proteins that are highly conserved in species ranging from archaea to vertebrates and plants [1], including several Shwachman-Bodian-Diamond syndrome (SBDS) proteins from both mouse and humans. Shwachman ...This entry represents the N-terminal domain of proteins that are highly conserved in species ranging from archaea to vertebrates and plants [1], including several Shwachman-Bodian-Diamond syndrome (SBDS) proteins from both mouse and humans. Shwachman-Diamond syndrome is an autosomal recessive disorder with clinical features that include pancreatic exocrine insufficiency, haematological dysfunction and skeletal abnormalities. It is characterised by bone marrow failure and leukemia predisposition. Members of this entry play a role in RNA metabolism [2][3]. In yeast these proteins have been shown to be critical for the release and recycling of the nucleolar shuttling factor Tif6 from pre-60S ribosomes, a key step in 60S maturation and translational activation of ribosomes [4]. This data links defective late 60S subunit maturation to an inherited bone marrow failure syndrome associated with leukemia predisposition [4].
Domain
PA [auth BP]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
PA [auth BP]PF20268SBDS protein, C-terminal domain (SBDS_C)SBDS protein, C-terminal domainMembers containing this domain are highly conserved in species ranging from archaea to vertebrates and plants [1], including several Shwachman-Bodian-Diamond syndrome (SBDS) proteins from both mouse and humans. Shwachman-Diamond syndrome is an autoso ...Members containing this domain are highly conserved in species ranging from archaea to vertebrates and plants [1], including several Shwachman-Bodian-Diamond syndrome (SBDS) proteins from both mouse and humans. Shwachman-Diamond syndrome is an autosomal recessive disorder with clinical features that include pancreatic exocrine insufficiency, haematological dysfunction and skeletal abnormalities. These proteins play a role in RNA metabolism [2,3]. In yeast Sdo1 is involved in the biogenesis of the 60S ribosomal subunit and translational activation of ribosomes [4]. The SBDS protein is composed of three domains. The N-terminal (Pfam:PF01172) (FYSH) domain (domain I) is the most frequent target for disease mutations and contains a novel mixed alpha/beta-fold, the central domain (domain II, Pfam:PF09377) consists of a three-helical bundle and this C-terminal domain which has a ferredoxin-like fold [3,5].
Domain
OA [auth BO]PF00096Zinc finger, C2H2 type (zf-C2H2)Zinc finger, C2H2 typeThe C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, an ...The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [2].
Domain
OA [auth BO]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
MA [auth BM],
NA [auth BN]		PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
LA [auth BL]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
LA [auth BL]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
KA [auth BK]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
JA [auth BJ]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
HA [auth BH],
IA [auth BI]		PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
HA [auth BH],
IA [auth BI]		PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
HA [auth BH],
IA [auth BI]		PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
GA [auth BG]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
GA [auth BG]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
FA [auth BF]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
FA [auth BF]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
EA [auth BE]PF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
EA [auth BE]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
DA [auth BD]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
CA [auth BC]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
CA [auth BC]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
CA [auth BC]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
BA [auth BB]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
AA [auth BA]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth Ai]30S ribosomal protein S7
H [auth Ah]30S ribosomal protein S6e
G [auth Ag]30S ribosomal protein S5
QB [auth Bq]Unknown ribosomal protein---
PB [auth Bp]Predicted exosome subunit, UPF0023 family- -
OB [auth Bo]Nucleic acid-binding protein, containing C2H2 zinc-finger - -
LB [auth Bl]50S ribosomal protein L44e
KB [auth Bk]LSU ribosomal protein L41E- -
JB [auth Bj]50S ribosomal protein L40e
F [auth Af]30S ribosomal protein S4e
IB [auth Bi]50S ribosomal protein L39e
HB [auth Bh]50S ribosomal protein L37e
GB [auth Bg]50S ribosomal protein L37Ae
FB [auth Bf]Ribosomal protein eL35A---
EB [auth Be]50S ribosomal protein L34e
DB [auth Bd]50S ribosomal protein L32e
CB [auth Bc]50S ribosomal protein L31e
BB [auth Bb]50S ribosomal protein L30e
AB [auth Ba]50S ribosomal protein L30
ZA [auth BZ]50S ribosomal protein L29
E [auth Ae]30S ribosomal protein S4
YA [auth BY]50S ribosomal protein L24e
XA [auth BX]50S ribosomal protein L24
WA [auth BW]50S ribosomal protein L23
VA [auth BV]50S ribosomal protein L22
UA [auth BU]50S ribosomal protein L21e
TA [auth BT]50S ribosomal protein L18Ae
SA [auth BS]50S ribosomal protein L19e
RA [auth BR]50S ribosomal protein L18e
QA [auth BQ]50S ribosomal protein L18
PA [auth BP]50S ribosomal protein L15e
D [auth Ad]30S ribosomal protein S3Ae
OA [auth BO]50S ribosomal protein L15
MA [auth BM],
NA [auth BN]		50S ribosomal protein L14e
LA [auth BL]50S ribosomal protein L14
KA [auth BK]50S ribosomal protein L13
JA [auth BJ]50S ribosomal protein L10e
HA [auth BH],
IA [auth BI]		50S ribosomal protein L7Ae
GA [auth BG]50S ribosomal protein L6
FA [auth BF]50S ribosomal protein L5
EA [auth BE]50S ribosomal protein L4
DA [auth BD]50S ribosomal protein L3
C [auth Ac]30S ribosomal protein S3
CA [auth BC]50S ribosomal protein L2
BA [auth BB]5S ribosomal RNA---
AA [auth BA]23S ribosomal RNA---
Z [auth Az]Predicted zinc-ribbon RNA-binding protein involved in translation - -
Y [auth Ay]30S ribosomal protein S28e
X [auth Ax]30S ribosomal protein S27e
NB [auth Bn],
W [auth Aw]		30S ribosomal protein S24e
V [auth Av]30S ribosomal protein S19e
U [auth Au]30S ribosomal protein S19
MB [auth Bm],
T [auth At]		30S ribosomal protein S17e
B [auth Ab]30S ribosomal protein S2
S [auth As]30S ribosomal protein S17
R [auth Ar]30S ribosomal protein S14 type Z
Q [auth Aq]30S ribosomal protein S15
P [auth Ap]30S ribosomal protein S13
O [auth Ao]30S ribosomal protein S12
N [auth An]30S ribosomal protein S11
M [auth Am]30S ribosomal protein S10
L [auth Al]30S ribosomal protein S9
K [auth Ak]30S ribosomal protein S8e
J [auth Aj]30S ribosomal protein S8
A [auth Aa]16S ribosomal RNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth Ai]IPR000235Small ribosomal subunit protein uS7Family
I [auth Ai]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
I [auth Ai]IPR026018Small ribosomal subunit protein uS7, archaeaFamily
I [auth Ai]IPR023798Small ribosomal subunit protein uS7 domainDomain
I [auth Ai]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
H [auth Ah]IPR001377Small ribosomal subunit protein eS6Family
H [auth Ah]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
H [auth Ah]IPR020924Small ribosomal subunit protein eS6, archaeaFamily
G [auth Ag]IPR000851Small ribosomal subunit protein uS5Family
G [auth Ag]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
G [auth Ag]IPR005711Small ribosomal subunit protein uS5, eukaryota_archaeaFamily
G [auth Ag]IPR047866Small ribosomal subunit protein uS5, archaeaFamily
G [auth Ag]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
G [auth Ag]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
G [auth Ag]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
G [auth Ag]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
PB [auth Bp]IPR002140Ribosome maturation protein Sdo1/SBDSFamily
PB [auth Bp]IPR037188Ribosome maturation protein Sdo1/SBDS, central domain superfamilyHomologous Superfamily
PB [auth Bp]IPR018023Ribosome maturation protein SBDS, conserved siteConserved Site
PB [auth Bp]IPR035647EF-G domain III/V-likeHomologous Superfamily
PB [auth Bp]IPR018978Ribosome maturation protein SDO1/SBDS, central domainDomain
PB [auth Bp]IPR046928Ribosome maturation protein SDO1/SBDS, C-terminal domainDomain
PB [auth Bp]IPR039100Ribosome maturation protein Sdo1/SBDS-likeFamily
PB [auth Bp]IPR019783Ribosome maturation protein SDO1/SBDS, N-terminalDomain
PB [auth Bp]IPR036786Ribosome maturation protein SBDS, N-terminal domain superfamilyHomologous Superfamily
OB [auth Bo]IPR013087Zinc finger C2H2-typeDomain
OB [auth Bo]IPR036236Zinc finger C2H2 superfamilyHomologous Superfamily
LB [auth Bl]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
LB [auth Bl]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
LB [auth Bl]IPR000552Large ribosomal subunit protein eL42Family
JB [auth Bj]IPR023657Large ribosomal subunit protein eL40, archaeaFamily
JB [auth Bj]IPR001975Large ribosomal subunit protein eL40 domainDomain
JB [auth Bj]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
JB [auth Bj]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
F [auth Af]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
F [auth Af]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
F [auth Af]IPR002942RNA-binding S4 domainDomain
F [auth Af]IPR013845Small ribosomal subunit protein eS4, central regionDomain
F [auth Af]IPR000876Small ribosomal subunit protein eS4Family
F [auth Af]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
F [auth Af]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
F [auth Af]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
F [auth Af]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
IB [auth Bi]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
IB [auth Bi]IPR000077Large ribosomal subunit protein eL39Family
IB [auth Bi]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
HB [auth Bh]IPR001569Large ribosomal subunit protein eL37Family
HB [auth Bh]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
HB [auth Bh]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
HB [auth Bh]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
GB [auth Bg]IPR002674Large ribosomal subunit protein eL43Family
GB [auth Bg]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
GB [auth Bg]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
GB [auth Bg]IPR050522Eukaryotic ribosomal protein eL43Family
EB [auth Be]IPR008195Large ribosomal subunit protein eL34Family
EB [auth Be]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
EB [auth Be]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
EB [auth Be]IPR047868Large ribosomal subunit protein eL34, eukaryota/archaeaFamily
DB [auth Bd]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
DB [auth Bd]IPR023654Large ribosomal subunit protein eL32, archaeaFamily
DB [auth Bd]IPR001515Large ribosomal subunit protein eL32Family
DB [auth Bd]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
CB [auth Bc]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
CB [auth Bc]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
CB [auth Bc]IPR000054Large ribosomal subunit protein eL31Family
BB [auth Bb]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
BB [auth Bb]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
BB [auth Bb]IPR000231Large ribosomal subunit protein eL30Family
BB [auth Bb]IPR039109Large ribosomal subunit protein eL30-likeFamily
BB [auth Bb]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
AB [auth Ba]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
AB [auth Ba]IPR039699Large ribosomal subunit protein uL30Family
AB [auth Ba]IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
AB [auth Ba]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
AB [auth Ba]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
AB [auth Ba]IPR005997Large ribosomal subunit protein uL30, archaeaFamily
ZA [auth BZ]IPR001854Large ribosomal subunit protein uL29Family
ZA [auth BZ]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
ZA [auth BZ]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
E [auth Ae]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
E [auth Ae]IPR002942RNA-binding S4 domainDomain
E [auth Ae]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
E [auth Ae]IPR022802Small ribosomal subunit protein uS4, archaeaFamily
E [auth Ae]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
E [auth Ae]IPR022801Small ribosomal subunit protein uS4Family
E [auth Ae]IPR005710Small ribosomal subunit protein uS4, eukaryota/archaeaFamily
YA [auth BY]IPR011017TRASH domainDomain
YA [auth BY]IPR056366Large ribosomal subunit protein eL24Family
YA [auth BY]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
YA [auth BY]IPR055345Large ribosomal subunit protein eL24-like, archaeaFamily
YA [auth BY]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
YA [auth BY]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
XA [auth BX]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
XA [auth BX]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
XA [auth BX]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
XA [auth BX]IPR005824KOWDomain
XA [auth BX]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
XA [auth BX]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
WA [auth BW]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
WA [auth BW]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
WA [auth BW]IPR019985Large ribosomal subunit protein uL23Family
WA [auth BW]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
WA [auth BW]IPR013025Large ribosomal subunit protein uL23-likeFamily
VA [auth BV]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
VA [auth BV]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
VA [auth BV]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
VA [auth BV]IPR001063Large ribosomal subunit protein uL22Family
VA [auth BV]IPR057265Large ribosomal subunit protein uL22, archaeaFamily
UA [auth BU]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
UA [auth BU]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
UA [auth BU]IPR022856Large ribosomal subunit protein eL21, archaeaFamily
UA [auth BU]IPR001147Large ribosomal subunit protein eL21Family
UA [auth BU]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
TA [auth BT]IPR028877Large ribosomal subunit protein eL20Family
TA [auth BT]IPR023573Large ribosomal subunit protein eL20 domainDomain
SA [auth BS]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
SA [auth BS]IPR057259Ribosomal protein L19e, N-terminal domainDomain
SA [auth BS]IPR039547Large ribosomal subunit protein eL19Family
SA [auth BS]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
SA [auth BS]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
SA [auth BS]IPR057260Ribosomal protein L19e, C-terminal domainDomain
SA [auth BS]IPR000196Large ribosomal subunit protein eL19 domainDomain
RA [auth BR]IPR022947Large ribosomal subunit protein eL18, archaeaFamily
RA [auth BR]IPR021131Large ribosomal subunit protein uL15/eL18Domain
RA [auth BR]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
RA [auth BR]IPR000039Large ribosomal subunit protein eL18Family
RA [auth BR]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
QA [auth BQ]IPR057268Large ribosomal subunit protein uL18Family
QA [auth BQ]IPR057267Large ribosomal subunit protein uL18, archaeaFamily
QA [auth BQ]IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
PA [auth BP]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
PA [auth BP]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
PA [auth BP]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
PA [auth BP]IPR020926Large ribosomal subunit protein eL15, archaealFamily
PA [auth BP]IPR000439Large ribosomal subunit protein eL15Family
D [auth Ad]IPR001593Small ribosomal subunit protein eS1Family
D [auth Ad]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
D [auth Ad]IPR030838Small ribosomal subunit protein eS1, archaeaFamily
OA [auth BO]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
OA [auth BO]IPR021131Large ribosomal subunit protein uL15/eL18Domain
OA [auth BO]IPR030878Large ribosomal subunit protein uL15Family
OA [auth BO]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
OA [auth BO]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
MA [auth BM],
NA [auth BN]		IPR039660Large ribosomal subunit protein eL14Family
MA [auth BM],
NA [auth BN]		IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
MA [auth BM],
NA [auth BN]		IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
MA [auth BM],
NA [auth BN]		IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
MA [auth BM],
NA [auth BN]		IPR023651Large ribosomal subunit protein eL14, archaeaFamily
LA [auth BL]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
LA [auth BL]IPR000218Large ribosomal subunit protein uL14Family
LA [auth BL]IPR019971Large ribosomal subunit protein uL14, archaeaFamily
KA [auth BK]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
KA [auth BK]IPR005822Large ribosomal subunit protein uL13Family
KA [auth BK]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
KA [auth BK]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
KA [auth BK]IPR005755Large ribosomal subunit protein uL13, eukaryota/archaeaFamily
JA [auth BJ]IPR001197Large ribosomal subunit protein uL16, eukaryota/archaeaFamily
JA [auth BJ]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
JA [auth BJ]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryota/archaeaConserved Site
JA [auth BJ]IPR022981Large ribosomal subunit protein uL16, archaeaFamily
JA [auth BJ]IPR016180Large ribosomal subunit protein uL16 domainDomain
JA [auth BJ]IPR047873Large ribosomal subunit protein uL16Family
HA [auth BH],
IA [auth BI]		IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
HA [auth BH],
IA [auth BI]		IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
HA [auth BH],
IA [auth BI]		IPR022481Large ribosomal subunit protein eL8, archaeaFamily
HA [auth BH],
IA [auth BI]		IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
HA [auth BH],
IA [auth BI]		IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
HA [auth BH],
IA [auth BI]		IPR018492Ribosomal protein eL8/Nhp2 familyFamily
GA [auth BG]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
GA [auth BG]IPR019907Large ribosomal subunit protein uL6, archaeaFamily
GA [auth BG]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
GA [auth BG]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
GA [auth BG]IPR000702Large ribosomal subunit protein uL6-likeFamily
FA [auth BF]IPR057266Large ribosomal subunit protein uL5, eukaryota/archaeaFamily
FA [auth BF]IPR022804Large ribosomal subunit protein uL5, archaeaFamily
FA [auth BF]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
FA [auth BF]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
FA [auth BF]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
FA [auth BF]IPR002132Large ribosomal subunit protein uL5Family
EA [auth BE]IPR019970Large ribosomal subunit protein uL4, archaeaFamily
EA [auth BE]IPR002136Large ribosomal subunit protein uL4Family
EA [auth BE]IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
EA [auth BE]IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
EA [auth BE]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
DA [auth BD]IPR019928Large ribosomal subunit protein uL3, archaeaFamily
DA [auth BD]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
DA [auth BD]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
DA [auth BD]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
DA [auth BD]IPR000597Large ribosomal subunit protein uL3Family
DA [auth BD]IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
C [auth Ac]IPR005703Small ribosomal subunit protein uS3, eukaryota/archaealFamily
C [auth Ac]IPR027488Small ribosomal subunit protein uS3, archaeaFamily
C [auth Ac]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
C [auth Ac]IPR057258Small ribosomal subunit protein uS3Family
C [auth Ac]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
C [auth Ac]IPR004087K Homology domainDomain
C [auth Ac]IPR004044K Homology domain, type 2Domain
C [auth Ac]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
C [auth Ac]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
CA [auth BC]IPR023672Large ribosomal subunit protein uL2, archaea/eukaryotaFamily
CA [auth BC]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
CA [auth BC]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
CA [auth BC]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
CA [auth BC]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
CA [auth BC]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
CA [auth BC]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
CA [auth BC]IPR002171Large ribosomal subunit protein uL2Family
Z [auth Az]IPR044720Small ribosomal subunit protein aS21Family
Z [auth Az]IPR011668Ribosomal protein aS21, zinc-binding pocketDomain
Y [auth Ay]IPR028626Ribosomal protein eS28 conserved siteConserved Site
Y [auth Ay]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Y [auth Ay]IPR000289Small ribosomal subunit protein eS28Family
X [auth Ax]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
X [auth Ax]IPR000592Small ribosomal subunit protein eS27Family
X [auth Ax]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
NB [auth Bn],
W [auth Aw]		IPR001976Small ribosomal subunit protein eS24Family
NB [auth Bn],
W [auth Aw]		IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
NB [auth Bn],
W [auth Aw]		IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
NB [auth Bn],
W [auth Aw]		IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
V [auth Av]IPR001266Small ribosomal subunit protein eS19Family
V [auth Av]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
V [auth Av]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
V [auth Av]IPR027548Small ribosomal subunit protein eS19, archaeaFamily
V [auth Av]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
U [auth Au]IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
U [auth Au]IPR002222Small ribosomal subunit protein uS19Family
U [auth Au]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
U [auth Au]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
U [auth Au]IPR005713Small ribosomal subunit protein uS19, eukaryota/archaeaFamily
MB [auth Bm],
T [auth At]		IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
MB [auth Bm],
T [auth At]		IPR001210Small ribosomal subunit protein eS17Family
MB [auth Bm],
T [auth At]		IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
B [auth Ab]IPR023454Small ribosomal subunit protein uS2, archaeaFamily
B [auth Ab]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
B [auth Ab]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
B [auth Ab]IPR001865Small ribosomal subunit protein uS2Family
B [auth Ab]IPR005707Small ribosomal subunit protein uS2, eukaryota/archaeaFamily
S [auth As]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
S [auth As]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
S [auth As]IPR000266Small ribosomal subunit protein uS17Family
S [auth As]IPR019978Small ribosomal subunit protein uS17, archaealFamily
S [auth As]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
R [auth Ar]IPR001209Small ribosomal subunit protein uS14Family
R [auth Ar]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
R [auth Ar]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
R [auth Ar]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
R [auth Ar]IPR023676Small ribosomal subunit protein uS14, archaeaFamily
Q [auth Aq]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
Q [auth Aq]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
Q [auth Aq]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotaFamily
Q [auth Aq]IPR000589Small ribosomal subunit protein uS15Family
P [auth Ap]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
P [auth Ap]IPR001892Small ribosomal subunit protein uS13Family
P [auth Ap]IPR019977Small ribosomal subunit protein uS13, archaeaFamily
P [auth Ap]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
P [auth Ap]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
O [auth Ao]IPR006032Small ribosomal subunit protein uS12Family
O [auth Ao]IPR022863Ribosomal protein uS12, archaeaFamily
O [auth Ao]IPR005679Ribosomal protein uS12, bacteriaFamily
O [auth Ao]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
O [auth Ao]IPR005680Small ribosomal subunit protein uS12, eukaryota/archaeaFamily
N [auth An]IPR019961Small ribosomal subunit protein uS11, archaeaFamily
N [auth An]IPR001971Small ribosomal subunit protein uS11Family
N [auth An]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
N [auth An]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
M [auth Am]IPR001848Small ribosomal subunit protein uS10Family
M [auth Am]IPR027486Small ribosomal subunit protein uS10 domainDomain
M [auth Am]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
M [auth Am]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
M [auth Am]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
L [auth Al]IPR019958Small ribosomal subunit protein uS9, archaeaFamily
L [auth Al]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
L [auth Al]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
L [auth Al]IPR000754Small ribosomal subunit protein uS9Family
L [auth Al]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
K [auth Ak]IPR001047Small ribosomal subunit protein eS8Family
K [auth Ak]IPR020919Small ribosomal subunit protein eS8, archaeaFamily
K [auth Ak]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
K [auth Ak]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
J [auth Aj]IPR000630Small ribosomal subunit protein uS8Family
J [auth Aj]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
J [auth Aj]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily