6T3F | pdb_00006t3f

Crystal structure Nipah virus fusion glycoprotein in complex with a neutralising Fab fragment


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth F]SCOP2B SuperfamilyVirus ectodomain 8072297 3001628 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth L]ATP-synte6t3fL1 A: alpha bundlesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: ATP-syntECOD (develop294)
C [auth H]ATP-synte6t3fH1 A: alpha bundlesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: ATP-syntECOD (develop294)
A [auth F]ATP-synte6t3fF1 A: alpha bundlesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: ATP-syntECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B [auth L]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
C [auth H]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
B [auth L]mAb 66, anti-NiV-F DIII domain L-KAPPA Oryctolagus cuniculus (rabbit) IGKV1S3*02, IGKJ1-2*02, IGKJ1-2*01, IGKC1*01 V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA IG FAB-GAMMA-1_KAPPA IMGT (202610-0)
C [auth H]mAb 66, anti-NiV-F DIII domain VH-CH1 Oryctolagus cuniculus (rabbit) IGHV1S43*01, IGHJ6*02, IGHG*01, IGHG*05, IGHG*02 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-1_KAPPA IMGT (202610-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B [auth L]Light ChainIGKV1 Kappafusion glycoprotein f0SAbDab (2026-03-20)
C [auth H]Heavy ChainIGHV1 -fusion glycoprotein f0SAbDab (2026-03-20)

InterPro: Protein Family Classification InterPro Database Homepage