6YAG
Crystal structure of PnrA from S. pneumoniae in complex with thymidine
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A [auth C] | Bmp_1st | e6yagC2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Periplasmic binding protein-like I | F: Bmp_1st | ECOD (1.6) |
| A [auth C] | Bmp_2nd | e6yagC1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Periplasmic binding protein-like I | F: Bmp_2nd | ECOD (1.6) |
| B [auth A] | Bmp_1st | e6yagA2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Periplasmic binding protein-like I | F: Bmp_1st | ECOD (1.6) |
| B [auth A] | Bmp_2nd | e6yagA1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Periplasmic binding protein-like I | F: Bmp_2nd | ECOD (1.6) |
| C [auth B] | Bmp_1st | e6yagB2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Periplasmic binding protein-like I | F: Bmp_1st | ECOD (1.6) |
| C [auth B] | Bmp_2nd | e6yagB1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Periplasmic binding protein-like I | F: Bmp_2nd | ECOD (1.6) |
| D | Bmp_1st | e6yagD2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Periplasmic binding protein-like I | F: Bmp_1st | ECOD (1.6) |
| D | Bmp_2nd | e6yagD1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Periplasmic binding protein-like I | F: Bmp_2nd | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A [auth C], B [auth A], C [auth B], D | PF02608 | ABC transporter substrate-binding protein PnrA-like (Bmp) | ABC transporter substrate-binding protein PnrA-like | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| A [auth C], B [auth A], C [auth B], D | Lipoprotein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A [auth C], B [auth A], C [auth B], D | IPR028082 | Periplasmic binding protein-like I | Homologous Superfamily |
| A [auth C], B [auth A], C [auth B], D | IPR050957 | BMP Lipoprotein | Family |
| A [auth C], B [auth A], C [auth B], D | IPR003760 | ABC transporter substrate-binding protein PnrA-like | Domain |
