6YQA
Taka-amylase in complex with alpha-glucosyl epi-cyclophellitol aziridine inhibitor
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth AAA] | DUF1966 | e6yqaAAA2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: DUF1966 | ECOD (1.6) |
A [auth AAA] | Alpha-amylase | e6yqaAAA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Alpha-amylase | ECOD (1.6) |
B [auth BBB] | DUF1966 | e6yqaBBB2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: DUF1966 | ECOD (1.6) |
B [auth BBB] | Alpha-amylase | e6yqaBBB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Alpha-amylase | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth AAA], B [auth BBB] | PF00128 | Alpha amylase, catalytic domain (Alpha-amylase) | Alpha amylase, catalytic domain | Alpha amylase is classified as family 13 of the glycosyl hydrolases. The structure is an 8 stranded alpha/beta barrel containing the active site, interrupted by a ~70 a.a. calcium-binding domain protruding between beta strand 3 and alpha helix 3, a ... | Domain |
A [auth AAA], B [auth BBB] | PF09260 | Alpha-amylase, domain C (A_amylase_dom_C) | Alpha-amylase, domain C | This domain is found at the C-terminal of various fungal alpha-amylase proteins [1]. It has been identified as a secondary binding site, which might be part of a starch interaction site [2]. It has a beta- sandwich fold comprising an antiparallel bet ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth AAA], B [auth BBB] | Alpha-amylase | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth AAA], B [auth BBB] | IPR013777 | Alpha-amylase-like | Family |
A [auth AAA], B [auth BBB] | IPR015340 | Alpha-amylase, domain C | Domain |
A [auth AAA], B [auth BBB] | IPR006047 | Glycosyl hydrolase, family 13, catalytic domain | Domain |
A [auth AAA], B [auth BBB] | IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily |
A [auth AAA], B [auth BBB] | IPR006046 | Alpha amylase | Family |
A [auth AAA], B [auth BBB] | IPR013780 | Glycosyl hydrolase, all-beta | Homologous Superfamily |