6Z5S | pdb_00006z5s

RC-LH1(14)-W complex from Rhodopseudomonas palustris

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: mpstruc
Protein Modification Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
DA [auth I]	d6z5si_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
F [auth 2]	d6z5s2_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
FA [auth F]	d6z5sf_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
H [auth 6]	d6z5s6_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
J [auth 4]	d6z5s4_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
L [auth Z]	d6z5sz_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
N [auth X]	d6z5sx_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
P [auth U]	d6z5su_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
V [auth S]	d6z5ss_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
Z [auth O]	d6z5so_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
X [auth Q]	d6z5sq_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
T [auth D]	d6z5sd_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
R [auth B]	d6z5sb_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
BA [auth K]	d6z5sk_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
AA [auth J]	d6z5sj_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
CA [auth G]	d6z5sg_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
E [auth 1]	d6z5s1_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
EA [auth E]	d6z5se_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
G [auth 5]	d6z5s5_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
M [auth V]	d6z5sv_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
O [auth T]	d6z5st_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
Q [auth A]	d6z5sa_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
S [auth C]	d6z5sc_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
W [auth P]	d6z5sp_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
Y [auth N]	d6z5sn_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
U [auth R]	d6z5sr_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
K [auth Y]	d6z5sy_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
I [auth 3]	d6z5s3_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
D [auth H]	d6z5sh2	All beta proteins	PRC-barrel domain	PRC-barrel domain	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
D [auth H]	d6z5sh1	Membrane and cell surface proteins and peptides	Single transmembrane helix	Photosystem II reaction centre subunit H, transmembrane region	automated matches	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
C [auth L]	d6z5sl_	Membrane and cell surface proteins and peptides	Bacterial photosystem II reaction centre, L and M subunits	Bacterial photosystem II reaction centre, L and M subunits	Bacterial photosystem II reaction centre, L and M subunits	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)
B [auth M]	d6z5sm_	Membrane and cell surface proteins and peptides	Bacterial photosystem II reaction centre, L and M subunits	Bacterial photosystem II reaction centre, L and M subunits	Bacterial photosystem II reaction centre, L and M subunits	automated matches	(Rhodopseudomonas palustris CGA009 ) [TaxId: 258594 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
DA [auth I]	SCOP2B Superfamily	Light-harvesting complex subunits	8102188	3000199	SCOP2B (2022-06-29)
F [auth 2]	SCOP2B Superfamily	Light-harvesting complex subunits	8102188	3000199	SCOP2B (2022-06-29)
FA [auth F]	SCOP2B Superfamily	Light-harvesting complex subunits	8102188	3000199	SCOP2B (2022-06-29)
J [auth 4]	SCOP2B Superfamily	Light-harvesting complex subunits	8102188	3000199	SCOP2B (2022-06-29)
L [auth Z]	SCOP2B Superfamily	Light-harvesting complex subunits	8102188	3000199	SCOP2B (2022-06-29)
N [auth X]	SCOP2B Superfamily	Light-harvesting complex subunits	8102188	3000199	SCOP2B (2022-06-29)
P [auth U]	SCOP2B Superfamily	Light-harvesting complex subunits	8102188	3000199	SCOP2B (2022-06-29)
V [auth S]	SCOP2B Superfamily	Light-harvesting complex subunits	8102188	3000199	SCOP2B (2022-06-29)
Z [auth O]	SCOP2B Superfamily	Light-harvesting complex subunits	8102188	3000199	SCOP2B (2022-06-29)
X [auth Q]	SCOP2B Superfamily	Light-harvesting complex subunits	8102188	3000199	SCOP2B (2022-06-29)
T [auth D]	SCOP2B Superfamily	Light-harvesting complex subunits	8102188	3000199	SCOP2B (2022-06-29)
R [auth B]	SCOP2B Superfamily	Light-harvesting complex subunits	8102188	3000199	SCOP2B (2022-06-29)
BA [auth K]	SCOP2B Superfamily	Light-harvesting complex subunits	8102188	3000199	SCOP2B (2022-06-29)
C [auth L]	SCOP2B Superfamily	Bacterial photosystem II reaction centre, L and M subunits	8102114	3000736	SCOP2B (2022-06-29)
B [auth M]	SCOP2B Superfamily	Bacterial photosystem II reaction centre, L and M subunits	8102018	3000736	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
DA [auth I]	WD40	e6z5sI1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
F [auth 2]	WD40	e6z5s21	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
FA [auth F]	WD40	e6z5sF1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
H [auth 6]	WD40	e6z5s61	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
J [auth 4]	WD40	e6z5s41	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
L [auth Z]	WD40	e6z5sZ1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
N [auth X]	WD40	e6z5sX1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
P [auth U]	WD40	e6z5sU1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
V [auth S]	WD40	e6z5sS1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
Z [auth O]	WD40	e6z5sO1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
X [auth Q]	WD40	e6z5sQ1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
T [auth D]	WD40	e6z5sD1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
R [auth B]	WD40	e6z5sB1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
BA [auth K]	WD40	e6z5sK1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
AA [auth J]	WD40	e6z5sJ1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
CA [auth G]	WD40	e6z5sG1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
E [auth 1]	WD40	e6z5s11	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
EA [auth E]	WD40	e6z5sE1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
G [auth 5]	WD40	e6z5s51	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
M [auth V]	WD40	e6z5sV1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
O [auth T]	WD40	e6z5sT1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
Q [auth A]	WD40	e6z5sA1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
S [auth C]	WD40	e6z5sC1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
W [auth P]	WD40	e6z5sP1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
Y [auth N]	WD40	e6z5sN1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
U [auth R]	WD40	e6z5sR1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
K [auth Y]	WD40	e6z5sY1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
I [auth 3]	WD40	e6z5s31	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
D [auth H]	WD40	e6z5sH1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
C [auth L]	WD40	e6z5sL1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)
B [auth M]	WD40	e6z5sM1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
BA [auth K], DA [auth I], F [auth 2], FA [auth F], H [auth 6], BA [auth K], DA [auth I], F [auth 2], FA [auth F], H [auth 6], J [auth 4], L [auth Z], N [auth X], P [auth U], R [auth B], T [auth D], V [auth S], X [auth Q], Z [auth O]	PF00556	Antenna complex alpha/beta subunit (LHC)	Antenna complex alpha/beta subunit		Domain
AA [auth J], CA [auth G], E [auth 1], EA [auth E], G [auth 5], AA [auth J], CA [auth G], E [auth 1], EA [auth E], G [auth 5], I [auth 3], K [auth Y], M [auth V], O [auth T], Q [auth A], S [auth C], U [auth R], W [auth P], Y [auth N]	PF00556	Antenna complex alpha/beta subunit (LHC)	Antenna complex alpha/beta subunit		Domain
D [auth H]	PF03967	Photosynthetic reaction centre, H-chain N-terminal region (PRCH)	Photosynthetic reaction centre, H-chain N-terminal region	-	Family
D [auth H]	PF05239	PRC-barrel domain (PRC)	PRC-barrel domain	The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, ...	The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, archaea and plants. This domain is also present at the carboxyl terminus of the pan-bacterial protein RimM, which is involved in ribosomal maturation and processing of 16S rRNA. A family of small proteins conserved in all known euryarchaea are composed entirely of a single stand-alone copy of the domain [1].	Domain
B [auth M]	PF00124	Photosynthetic reaction centre protein (Photo_RC)	Photosynthetic reaction centre protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
BA [auth K], DA [auth I], F [auth 2], FA [auth F], H [auth 6], BA [auth K], DA [auth I], F [auth 2], FA [auth F], H [auth 6], J [auth 4], L [auth Z], N [auth X], P [auth U], R [auth B], T [auth D], V [auth S], X [auth Q], Z [auth O]	Light-harvesting complex 1 beta chain	chlorophyll binding binding bacteriochlorophyll binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction metabolic process cellular process generation of precursor metabolites and energy	cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle cytoplasm vesicle
AA [auth J], CA [auth G], E [auth 1], EA [auth E], G [auth 5], AA [auth J], CA [auth G], E [auth 1], EA [auth E], G [auth 5], I [auth 3], K [auth Y], M [auth V], O [auth T], Q [auth A], S [auth C], U [auth R], W [auth P], Y [auth N]	Light-harvesting complex 1 alpha chain	chlorophyll binding binding bacteriochlorophyll binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction metabolic process cellular process generation of precursor metabolites and energy	membrane-bounded organelle intracellular organelle organelle envelope organelle inner membrane cellular anatomical structure intracellular anatomical structure organelle membrane organelle membrane cell periphery plasma membrane plasma membrane light-harvesting complex protein-containing complex intracellular vesicle membrane-bounded organelle intracellular organelle organelle envelope organelle inner membrane cellular anatomical structure intracellular anatomical structure organelle membrane organelle membrane cell periphery plasma membrane plasma membrane light-harvesting complex protein-containing complex intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle cytoplasmic vesicle cytoplasm vesicle
D [auth H]	H subunit of photosynthetic reaction center complex	-	photosynthesis photosynthesis, light reaction metabolic process cellular process generation of precursor metabolites and energy	membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cellular anatomical structure cytoplasmic vesicle organelle cytoplasm vesicle
C [auth L]	Reaction center protein L chain	chlorophyll binding binding bacteriochlorophyll binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain electron transport chain photosynthetic electron transport in photosystem II metabolic process cellular process generation of precursor metabolites and energy	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane intracellular membraneless organelle plasma membrane-derived chromatophore intracellular organelle cellular anatomical structure organelle membraneless organelle cytoplasm photosynthetic membrane thylakoid membrane-bounded organelle plasma membrane light-harvesting complex intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane intracellular membraneless organelle plasma membrane-derived chromatophore intracellular organelle cellular anatomical structure organelle membraneless organelle cytoplasm photosynthetic membrane thylakoid membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular vesicle light-harvesting complex intracellular membrane-bounded organelle cytoplasmic vesicle vesicle
B [auth M]	Reaction center protein M chain	chlorophyll binding binding bacteriochlorophyll binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain electron transport chain photosynthetic electron transport in photosystem II metabolic process cellular process generation of precursor metabolites and energy	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane intracellular membraneless organelle plasma membrane-derived chromatophore intracellular organelle cellular anatomical structure organelle membraneless organelle cytoplasm photosynthetic membrane thylakoid membrane-bounded organelle plasma membrane light-harvesting complex intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane intracellular membraneless organelle plasma membrane-derived chromatophore intracellular organelle cellular anatomical structure organelle membraneless organelle cytoplasm photosynthetic membrane thylakoid membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular vesicle light-harvesting complex intracellular membrane-bounded organelle cytoplasmic vesicle vesicle
A [auth W]	Light harvesting complex 1 Protein W	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
BA [auth K], DA [auth I], F [auth 2], FA [auth F], H [auth 6], BA [auth K], DA [auth I], F [auth 2], FA [auth F], H [auth 6], J [auth 4], L [auth Z], N [auth X], P [auth U], R [auth B], T [auth D], V [auth S], X [auth Q], Z [auth O]	IPR000066	Antenna complex, alpha/beta subunit	Domain
BA [auth K], DA [auth I], F [auth 2], FA [auth F], H [auth 6], BA [auth K], DA [auth I], F [auth 2], FA [auth F], H [auth 6], J [auth 4], L [auth Z], N [auth X], P [auth U], R [auth B], T [auth D], V [auth S], X [auth Q], Z [auth O]	IPR023624	Antenna complex, beta domain superfamily	Homologous Superfamily
BA [auth K], DA [auth I], F [auth 2], FA [auth F], H [auth 6], BA [auth K], DA [auth I], F [auth 2], FA [auth F], H [auth 6], J [auth 4], L [auth Z], N [auth X], P [auth U], R [auth B], T [auth D], V [auth S], X [auth Q], Z [auth O]	IPR035889	Light-harvesting complex	Homologous Superfamily
BA [auth K], DA [auth I], F [auth 2], FA [auth F], H [auth 6], BA [auth K], DA [auth I], F [auth 2], FA [auth F], H [auth 6], J [auth 4], L [auth Z], N [auth X], P [auth U], R [auth B], T [auth D], V [auth S], X [auth Q], Z [auth O]	IPR023623	Antenna complex, beta subunit, conserved site	Conserved Site
BA [auth K], DA [auth I], F [auth 2], FA [auth F], H [auth 6], BA [auth K], DA [auth I], F [auth 2], FA [auth F], H [auth 6], J [auth 4], L [auth Z], N [auth X], P [auth U], R [auth B], T [auth D], V [auth S], X [auth Q], Z [auth O]	IPR002362	Light-harvesting protein B beta chain	Family
AA [auth J], CA [auth G], E [auth 1], EA [auth E], G [auth 5], AA [auth J], CA [auth G], E [auth 1], EA [auth E], G [auth 5], I [auth 3], K [auth Y], M [auth V], O [auth T], Q [auth A], S [auth C], U [auth R], W [auth P], Y [auth N]	IPR000066	Antenna complex, alpha/beta subunit	Domain
AA [auth J], CA [auth G], E [auth 1], EA [auth E], G [auth 5], AA [auth J], CA [auth G], E [auth 1], EA [auth E], G [auth 5], I [auth 3], K [auth Y], M [auth V], O [auth T], Q [auth A], S [auth C], U [auth R], W [auth P], Y [auth N]	IPR018332	Antenna complex, alpha subunit	Family
AA [auth J], CA [auth G], E [auth 1], EA [auth E], G [auth 5], AA [auth J], CA [auth G], E [auth 1], EA [auth E], G [auth 5], I [auth 3], K [auth Y], M [auth V], O [auth T], Q [auth A], S [auth C], U [auth R], W [auth P], Y [auth N]	IPR002361	Antenna complex, alpha subunit conserved site	Conserved Site
AA [auth J], CA [auth G], E [auth 1], EA [auth E], G [auth 5], AA [auth J], CA [auth G], E [auth 1], EA [auth E], G [auth 5], I [auth 3], K [auth Y], M [auth V], O [auth T], Q [auth A], S [auth C], U [auth R], W [auth P], Y [auth N]	IPR035889	Light-harvesting complex	Homologous Superfamily
D [auth H]	IPR014747	Bacterial photosynthetic reaction centre, H-chain, C-terminal	Homologous Superfamily
D [auth H]	IPR015810	Photosynthetic reaction centre, H subunit, N-terminal	Domain
D [auth H]	IPR005652	Photosynthetic reaction centre, H subunit	Family
D [auth H]	IPR037097	Photosynthetic reaction centre, H subunit, N-terminal domain superfamily	Homologous Superfamily
D [auth H]	IPR011033	PRC-barrel-like superfamily	Homologous Superfamily
D [auth H]	IPR027275	PRC-barrel domain	Domain
C [auth L]	IPR036854	Photosystem II protein D1/D2 superfamily	Homologous Superfamily
C [auth L]	IPR000484	Photosynthetic reaction centre, L/M	Family
C [auth L]	IPR055265	Photosynthetic reaction centre, L/M, conserved site	Conserved Site
C [auth L]	IPR005871	Photosynthetic reaction centre, L subunit	Family
B [auth M]	IPR036854	Photosystem II protein D1/D2 superfamily	Homologous Superfamily
B [auth M]	IPR005781	Photosynthetic reaction centre, M subunit	Family
B [auth M]	IPR000484	Photosynthetic reaction centre, L/M	Family
B [auth M]	IPR055265	Photosynthetic reaction centre, L/M, conserved site	Conserved Site

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A [auth W], AA [auth J], B [auth M], BA [auth K], C [auth L] A [auth W], AA [auth J], B [auth M], BA [auth K], C [auth L], CA [auth G], D [auth H], DA [auth I], E [auth 1], EA [auth E], F [auth 2], FA [auth F], G [auth 5], H [auth 6], I [auth 3], J [auth 4], K [auth Y], L [auth Z], M [auth V], N [auth X], O [auth T], P [auth U], Q [auth A], R [auth B], S [auth C], T [auth D], U [auth R], V [auth S], W [auth P], X [auth Q], Y [auth N], Z [auth O]	OPM	Transmembrane	Alpha-helical polytopic	Photosystems	Bacterial photosystems

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A [auth W], AA [auth J], B [auth M], BA [auth K], C [auth L] A [auth W], AA [auth J], B [auth M], BA [auth K], C [auth L], CA [auth G], D [auth H], DA [auth I], E [auth 1], EA [auth E], F [auth 2], FA [auth F], G [auth 5], H [auth 6], I [auth 3], J [auth 4], K [auth Y], L [auth Z], M [auth V], N [auth X], O [auth T], P [auth U], Q [auth A], R [auth B], S [auth C], T [auth D], U [auth R], V [auth S], W [auth P], X [auth Q], Y [auth N], Z [auth O]	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A [auth W], AA [auth J], B [auth M], BA [auth K], C [auth L] A [auth W], AA [auth J], B [auth M], BA [auth K], C [auth L], CA [auth G], D [auth H], DA [auth I], E [auth 1], EA [auth E], F [auth 2], FA [auth F], G [auth 5], H [auth 6], I [auth 3], J [auth 4], K [auth Y], L [auth Z], M [auth V], N [auth X], O [auth T], P [auth U], Q [auth A], R [auth B], S [auth C], T [auth D], U [auth R], V [auth S], W [auth P], X [auth Q], Y [auth N], Z [auth O]	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Light-Harvesting+Reaction Center Complexes	RC-LH1₁₄-W complex

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
AA [auth J], CA [auth G], E [auth 1], EA [auth E], G [auth 5], AA [auth J], CA [auth G], E [auth 1], EA [auth E], G [auth 5], I [auth 3], K [auth Y], M [auth V], O [auth T], Q [auth A], S [auth C], U [auth R], W [auth P], Y [auth N]	FME	Parent Component: MET RESID: AA0021 , AA0566 PSI-MOD : N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891