6ZMR | pdb_00006zmr

Porcine ATP synthase Fo domain


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
L [auth d]e6zmrd01 A: a/b three-layered sandwichesX: Rossmann-likeH: all-alpha NTP pyrophosphatasesT: Hypothetical protein AF_0060F:ECOD (v294.1)
K [auth b]e6zmrb01 A: a/b three-layered sandwichesX: Rossmann-likeH: all-alpha NTP pyrophosphatasesT: Hypothetical protein AF_0060F:ECOD (v294.1)
J [auth a]bCoV_S1_Ne6zmra1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: bCoV_S1_NECOD (v294.1)
I [auth R]Pro_isomerasee6zmrR1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Pro_isomeraseECOD (v294.1)
H [auth Q]Pro_isomerasee6zmrQ1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Pro_isomeraseECOD (v294.1)
G [auth P]Pro_isomerasee6zmrP1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Pro_isomeraseECOD (v294.1)
F [auth O]Pro_isomerasee6zmrO1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Pro_isomeraseECOD (v294.1)
E [auth N]Pro_isomerasee6zmrN1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Pro_isomeraseECOD (v294.1)
D [auth M]Pro_isomerasee6zmrM1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Pro_isomeraseECOD (v294.1)
C [auth L]Pro_isomerasee6zmrL1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Pro_isomeraseECOD (v294.1)
B [auth K]Pro_isomerasee6zmrK1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Pro_isomeraseECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
H [auth Q]1.20.20.10 Mainly Alpha Up-down Bundle F1FO ATP Synthase F1F0 ATP synthase subunit CCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00137ATP synthase subunit C (ATP-synt_C)ATP synthase subunit CThis domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. Domain
A [auth 8]PF00895ATP synthase protein 8 (ATP-synt_8)ATP synthase protein 8- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
P [auth j]ATP synthase j subunit (6.8PL)- -
O [auth g]ATP synthase g subunit
N [auth f]ATP synthase subunit f, mitochondrial-
M [auth e]ATP synthase subunit e, mitochondrial
L [auth d]ATP synthase subunit d, mitochondrial
K [auth b]ATP synthase peripheral stalk-membrane subunit b
J [auth a]ATP synthase subunit a
ATP synthase F(0) complex subunit C1, mitochondrial
Q [auth k]ATP synthase membrane subunit DAPIT- -
A [auth 8]ATP synthase protein 8

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
P [auth j]IPR012574ATP synthase subunit ATP5MJ, mitochondrialFamily
O [auth g]IPR016702ATP synthase, F0 complex, gamma subunit, metazoaFamily
O [auth g]IPR006808ATP synthase F0 complex subunit G, mitochondrialFamily
N [auth f]IPR019344Mitochondrial F1-F0 ATP synthase subunit F, predictedFamily
M [auth e]IPR008386ATP synthase, F0 complex, subunit E, mitochondrialFamily
L [auth d]IPR036228ATP synthase, F0 complex, subunit D superfamily, mitochondrialHomologous Superfamily
L [auth d]IPR008689ATP synthase, F0 complex, subunit D, mitochondrialFamily
K [auth b]IPR008688ATP synthase, F0 complex, subunit B/MI25Family
K [auth b]IPR013837ATP synthase, F0 complex, subunit BFamily
J [auth a]IPR023011ATP synthase, F0 complex, subunit A, active siteActive Site
J [auth a]IPR000568ATP synthase, F0 complex, subunit AFamily
J [auth a]IPR035908ATP synthase, F0 complex, subunit A superfamilyHomologous Superfamily
J [auth a]IPR045083ATP synthase, F0 complex, subunit A, bacterial/mitochondriaFamily
IPR035921F/V-ATP synthase subunit C superfamilyHomologous Superfamily
IPR038662F1F0 ATP synthase subunit C superfamilyHomologous Superfamily
IPR020537ATP synthase, F0 complex, subunit C, DCCD-binding siteBinding Site
IPR000454ATP synthase, F0 complex, subunit CFamily
IPR002379V-ATPase proteolipid subunit C-like domainDomain
Q [auth k]IPR009125ATP synthase membrane subunit KFamily
A [auth 8]IPR039017ATP synthase protein 8, mammalsFamily
A [auth 8]IPR001421ATP synthase protein 8, metazoaFamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
M3L Parent Component: LYS

RESIDAA0074

PSI-MOD :  N6,N6,N6-trimethyl-L-lysine MOD:00083