6ZW6 | pdb_00006zw6

C16 symmetry: Bacterial Vipp1 and PspA are members of the ancient ESCRT-III membrane-remodeling superfamily.

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Trypsin	e6zw6A1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
AD [auth BD]	Glyco_transf_41	e6zw6BD1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
BA [auth CA]	Glyco_transf_41	e6zw6CA1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
BD [auth CD]	Trypsin	e6zw6CD1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
CA [auth DA]	Trypsin	e6zw6DA1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
DB [auth EB]	Glyco_transf_41	e6zw6EB1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
EB [auth FB]	Trypsin	e6zw6FB1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
FC [auth GC]	Glyco_transf_41	e6zw6GC1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
G	Glyco_transf_41	e6zw6G1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
GC [auth HC]	Trypsin	e6zw6HC1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
H	Trypsin	e6zw6H1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
HD [auth ID]	Glyco_transf_41	e6zw6ID1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
IA [auth JA]	Glyco_transf_41	e6zw6JA1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
JA [auth KA]	Trypsin	e6zw6KA1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
KB [auth LB]	Glyco_transf_41	e6zw6LB1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
LB [auth MB]	Trypsin	e6zw6MB1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
MC [auth NC]	Glyco_transf_41	e6zw6NC1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
N	Glyco_transf_41	e6zw6N1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
NC [auth OC]	Trypsin	e6zw6OC1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
O	Trypsin	e6zw6O1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
PA [auth QA]	Glyco_transf_41	e6zw6QA1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
QA [auth RA]	Trypsin	e6zw6RA1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
RB [auth SB]	Glyco_transf_41	e6zw6SB1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
SB [auth TB]	Trypsin	e6zw6TB1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
TC [auth UC]	Glyco_transf_41	e6zw6UC1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
U [auth V]	Glyco_transf_41	e6zw6V1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
UC [auth VC]	Trypsin	e6zw6VC1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
V [auth W]	Trypsin	e6zw6W1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
WA [auth XA]	Glyco_transf_41	e6zw6XA1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
XA [auth YA]	Trypsin	e6zw6YA1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)
YB [auth ZB]	Glyco_transf_41	e6zw6ZB1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (develop294)
ZB [auth AC]	Trypsin	e6zw6AC1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (develop294)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, AA [auth BA], AB [auth BB], AC [auth BC], AD [auth BD], A, AA [auth BA], AB [auth BB], AC [auth BC], AD [auth BD], B, BA [auth CA], BB [auth CB], BC [auth CC], BD [auth CD], C, CA [auth DA], CB [auth DB], CC [auth DC], CD [auth DD], D, DA [auth EA], DB [auth EB], DC [auth EC], DD [auth ED], E, EA [auth FA], EB [auth FB], EC [auth FC], ED [auth FD], F, FA [auth GA], FB [auth GB], FC [auth GC], FD [auth GD], G, GA [auth HA], GB [auth HB], GC [auth HC], GD [auth HD], H, HA [auth IA], HB [auth IB], HC [auth IC], HD [auth ID], I, IA [auth JA], IB [auth JB], IC [auth JC], J, JA [auth KA], JB [auth KB], JC [auth KC], K, KA [auth LA], KB [auth LB], KC [auth LC], L, LA [auth MA], LB [auth MB], LC [auth MC], M, MA [auth NA], MB [auth NB], MC [auth NC], N, NA [auth OA], NB [auth OB], NC [auth OC], O, OA [auth PA], OB [auth PB], OC [auth PC], P, PA [auth QA], PB [auth QB], PC [auth QC], Q, QA [auth RA], QB [auth RB], QC [auth RC], R, RA [auth SA], RB [auth SB], RC [auth SC], S, SA [auth TA], SB [auth TB], SC [auth TC], T, TA [auth UA], TB [auth UB], TC [auth UC], U [auth V], UA [auth VA], UB [auth VB], UC [auth VC], V [auth W], VA [auth WA], VB [auth WB], VC [auth WC], W [auth X], WA [auth XA], WB [auth XB], WC [auth XC], X [auth Y], XA [auth YA], XB [auth YB], XC [auth YC], Y [auth Z], YA [auth ZA], YB [auth ZB], YC [auth ZC], Z [auth AA], ZA [auth AB], ZB [auth AC], ZC [auth AD]	PF04012	PspA/IM30 family (PspA_IM30)	PspA/IM30 family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, AA [auth BA], AB [auth BB], AC [auth BC], AD [auth BD], A, AA [auth BA], AB [auth BB], AC [auth BC], AD [auth BD], B, BA [auth CA], BB [auth CB], BC [auth CC], BD [auth CD], C, CA [auth DA], CB [auth DB], CC [auth DC], CD [auth DD], D, DA [auth EA], DB [auth EB], DC [auth EC], DD [auth ED], E, EA [auth FA], EB [auth FB], EC [auth FC], ED [auth FD], F, FA [auth GA], FB [auth GB], FC [auth GC], FD [auth GD], G, GA [auth HA], GB [auth HB], GC [auth HC], GD [auth HD], H, HA [auth IA], HB [auth IB], HC [auth IC], HD [auth ID], I, IA [auth JA], IB [auth JB], IC [auth JC], J, JA [auth KA], JB [auth KB], JC [auth KC], K, KA [auth LA], KB [auth LB], KC [auth LC], L, LA [auth MA], LB [auth MB], LC [auth MC], M, MA [auth NA], MB [auth NB], MC [auth NC], N, NA [auth OA], NB [auth OB], NC [auth OC], O, OA [auth PA], OB [auth PB], OC [auth PC], P, PA [auth QA], PB [auth QB], PC [auth QC], Q, QA [auth RA], QB [auth RB], QC [auth RC], R, RA [auth SA], RB [auth SB], RC [auth SC], S, SA [auth TA], SB [auth TB], SC [auth TC], T, TA [auth UA], TB [auth UB], TC [auth UC], U [auth V], UA [auth VA], UB [auth VB], UC [auth VC], V [auth W], VA [auth WA], VB [auth WB], VC [auth WC], W [auth X], WA [auth XA], WB [auth XB], WC [auth XC], X [auth Y], XA [auth YA], XB [auth YB], XC [auth YC], Y [auth Z], YA [auth ZA], YB [auth ZB], YC [auth ZC], Z [auth AA], ZA [auth AB], ZB [auth AC], ZC [auth AD]	vipp1	binding lipid binding	-	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth BA], AB [auth BB], AC [auth BC], AD [auth BD], A, AA [auth BA], AB [auth BB], AC [auth BC], AD [auth BD], B, BA [auth CA], BB [auth CB], BC [auth CC], BD [auth CD], C, CA [auth DA], CB [auth DB], CC [auth DC], CD [auth DD], D, DA [auth EA], DB [auth EB], DC [auth EC], DD [auth ED], E, EA [auth FA], EB [auth FB], EC [auth FC], ED [auth FD], F, FA [auth GA], FB [auth GB], FC [auth GC], FD [auth GD], G, GA [auth HA], GB [auth HB], GC [auth HC], GD [auth HD], H, HA [auth IA], HB [auth IB], HC [auth IC], HD [auth ID], I, IA [auth JA], IB [auth JB], IC [auth JC], J, JA [auth KA], JB [auth KB], JC [auth KC], K, KA [auth LA], KB [auth LB], KC [auth LC], L, LA [auth MA], LB [auth MB], LC [auth MC], M, MA [auth NA], MB [auth NB], MC [auth NC], N, NA [auth OA], NB [auth OB], NC [auth OC], O, OA [auth PA], OB [auth PB], OC [auth PC], P, PA [auth QA], PB [auth QB], PC [auth QC], Q, QA [auth RA], QB [auth RB], QC [auth RC], R, RA [auth SA], RB [auth SB], RC [auth SC], S, SA [auth TA], SB [auth TB], SC [auth TC], T, TA [auth UA], TB [auth UB], TC [auth UC], U [auth V], UA [auth VA], UB [auth VB], UC [auth VC], V [auth W], VA [auth WA], VB [auth WB], VC [auth WC], W [auth X], WA [auth XA], WB [auth XB], WC [auth XC], X [auth Y], XA [auth YA], XB [auth YB], XC [auth YC], Y [auth Z], YA [auth ZA], YB [auth ZB], YC [auth ZC], Z [auth AA], ZA [auth AB], ZB [auth AC], ZC [auth AD]	IPR007157	PspA/VIPP1	Family