7CBM

Cryo-EM structure of the flagellar distal rod with partial hook from Salmonella


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DASCOP2B SuperfamilyFlagellar hook protein flgE8043628 3000296 SCOP2B (2022-06-29)
EA [auth DB]SCOP2B SuperfamilyFlagellar hook protein flgE8043628 3000296 SCOP2B (2022-06-29)
FA [auth DC]SCOP2B SuperfamilyFlagellar hook protein flgE8043628 3000296 SCOP2B (2022-06-29)
GA [auth DD]SCOP2B SuperfamilyFlagellar hook protein flgE8043628 3000296 SCOP2B (2022-06-29)
HA [auth DE]SCOP2B SuperfamilyFlagellar hook protein flgE8043628 3000296 SCOP2B (2022-06-29)
IA [auth DF]SCOP2B SuperfamilyFlagellar hook protein flgE8043628 3000296 SCOP2B (2022-06-29)
JA [auth DG]SCOP2B SuperfamilyFlagellar hook protein flgE8043628 3000296 SCOP2B (2022-06-29)
KA [auth DH]SCOP2B SuperfamilyFlagellar hook protein flgE8043628 3000296 SCOP2B (2022-06-29)
LA [auth DI]SCOP2B SuperfamilyFlagellar hook protein flgE8043628 3000296 SCOP2B (2022-06-29)
MA [auth DJ]SCOP2B SuperfamilyFlagellar hook protein flgE8043628 3000296 SCOP2B (2022-06-29)
NA [auth DK]SCOP2B SuperfamilyFlagellar hook protein flgE8043628 3000296 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF22692e7cbmA1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: PF22692ECOD (1.6)
APF00460,PF06429e7cbmA2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: PF00460,PF06429ECOD (1.6)
AA [auth V]PF22692e7cbmV1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: PF22692ECOD (1.6)
AA [auth V]PF00460,PF06429e7cbmV2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: PF00460,PF06429ECOD (1.6)
BPF22692e7cbmB1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: PF22692ECOD (1.6)
BPF00460,PF06429e7cbmB2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: PF00460,PF06429ECOD (1.6)
BA [auth W]PF22692e7cbmW1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: PF22692ECOD (1.6)
BA [auth W]PF00460,PF06429e7cbmW2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: PF00460,PF06429ECOD (1.6)
CPF22692e7cbmC1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: PF22692ECOD (1.6)
CPF00460,PF06429e7cbmC2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: PF00460,PF06429ECOD (1.6)
CA [auth X]PF22692e7cbmX1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: PF22692ECOD (1.6)
CA [auth X]PF00460,PF06429e7cbmX2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: PF00460,PF06429ECOD (1.6)
DPF22692e7cbmD1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: PF22692ECOD (1.6)
DPF00460,PF06429e7cbmD2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: PF00460,PF06429ECOD (1.6)
EPF22692e7cbmE1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: PF22692ECOD (1.6)
EPF00460,PF06429e7cbmE2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: PF00460,PF06429ECOD (1.6)
FPF22692e7cbmF1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: PF22692ECOD (1.6)
FPF00460,PF06429e7cbmF2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: PF00460,PF06429ECOD (1.6)
GPF22692e7cbmG1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: PF22692ECOD (1.6)
GPF00460,PF06429e7cbmG2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: PF00460,PF06429ECOD (1.6)
HPF22692e7cbmH1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: PF22692ECOD (1.6)
HPF00460,PF06429e7cbmH2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: PF00460,PF06429ECOD (1.6)
IPF22692e7cbmI1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: PF22692ECOD (1.6)
IPF00460,PF06429e7cbmI2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: PF00460,PF06429ECOD (1.6)
JPF22692e7cbmJ1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: PF22692ECOD (1.6)
JPF00460,PF06429e7cbmJ2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: PF00460,PF06429ECOD (1.6)
KPF22692e7cbmK1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: PF22692ECOD (1.6)
KPF00460,PF06429e7cbmK2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: PF00460,PF06429ECOD (1.6)
LPF22692e7cbmL1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: PF22692ECOD (1.6)
LPF00460,PF06429e7cbmL2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: PF00460,PF06429ECOD (1.6)
MPF22692e7cbmM1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: PF22692ECOD (1.6)
MPF00460,PF06429e7cbmM2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: PF00460,PF06429ECOD (1.6)
NPF22692e7cbmN1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: PF22692ECOD (1.6)
NPF00460,PF06429e7cbmN2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: PF00460,PF06429ECOD (1.6)
OPF22692e7cbmO1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: PF22692ECOD (1.6)
OPF00460,PF06429e7cbmO2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: PF00460,PF06429ECOD (1.6)
PPF22692e7cbmP1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: PF22692ECOD (1.6)
PPF00460,PF06429e7cbmP2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: PF00460,PF06429ECOD (1.6)
QPF22692e7cbmQ1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: PF22692ECOD (1.6)
QPF00460,PF06429e7cbmQ2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: PF00460,PF06429ECOD (1.6)
RPF22692e7cbmR1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: PF22692ECOD (1.6)
RPF00460,PF06429e7cbmR2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: PF00460,PF06429ECOD (1.6)
SPF22692e7cbmS1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: PF22692ECOD (1.6)
SPF00460,PF06429e7cbmS2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: PF00460,PF06429ECOD (1.6)
TPF22692e7cbmT1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: PF22692ECOD (1.6)
TPF00460,PF06429e7cbmT2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: PF00460,PF06429ECOD (1.6)
UPF22692e7cbmU1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: PF22692ECOD (1.6)
UPF00460,PF06429e7cbmU2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: PF00460,PF06429ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00460Flagella basal body rod protein (Flg_bb_rod)Flagella basal body rod protein- Family
PF06429Flagellar basal body rod FlgEFG protein C-terminal (Flg_bbr_C)Flagellar basal body rod FlgEFG protein C-terminalThis family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which Pfam:PF00460 is often present at the extreme N terminus.Domain
V [auth a],
W [auth b],
X [auth c],
Y [auth d],
Z [auth e]
PF00460Flagella basal body rod protein (Flg_bb_rod)Flagella basal body rod protein- Family
V [auth a],
W [auth b],
X [auth c],
Y [auth d],
Z [auth e]
PF06429Flagellar basal body rod FlgEFG protein C-terminal (Flg_bbr_C)Flagellar basal body rod FlgEFG protein C-terminalThis family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which Pfam:PF00460 is often present at the extreme N terminus.Domain
PF00460Flagella basal body rod protein (Flg_bb_rod)Flagella basal body rod protein- Family
PF06429Flagellar basal body rod FlgEFG protein C-terminal (Flg_bbr_C)Flagellar basal body rod FlgEFG protein C-terminalThis family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which Pfam:PF00460 is often present at the extreme N terminus.Domain
PF07559Flagellar basal body protein FlaE (FlaE)Flagellar basal body protein FlaE- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Flagellar basal-body rod protein FlgG-
V [auth a],
W [auth b],
X [auth c],
Y [auth d],
Z [auth e]
Flagellar basal-body rod protein FlgF-
Flagellar hook protein FlgE-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR019776Flagellar basal body rod protein, conserved siteConserved Site
IPR020013Flagellar hook-basal body protein, FlgE/F/GFamily
IPR010930Flagellar basal-body/hook protein, C-terminal domainDomain
IPR012834Flagellar basal-body rod FlgGFamily
IPR001444Flagellar basal body rod protein, N-terminalDomain
IPR037925Flagellar hook-basal body protein, FlgE/F/G-likeHomologous Superfamily
V [auth a],
W [auth b],
X [auth c],
Y [auth d],
Z [auth e]
IPR019776Flagellar basal body rod protein, conserved siteConserved Site
V [auth a],
W [auth b],
X [auth c],
Y [auth d],
Z [auth e]
IPR020013Flagellar hook-basal body protein, FlgE/F/GFamily
V [auth a],
W [auth b],
X [auth c],
Y [auth d],
Z [auth e]
IPR010930Flagellar basal-body/hook protein, C-terminal domainDomain
V [auth a],
W [auth b],
X [auth c],
Y [auth d],
Z [auth e]
IPR001444Flagellar basal body rod protein, N-terminalDomain
V [auth a],
W [auth b],
X [auth c],
Y [auth d],
Z [auth e]
IPR037925Flagellar hook-basal body protein, FlgE/F/G-likeHomologous Superfamily
IPR019776Flagellar basal body rod protein, conserved siteConserved Site
IPR020013Flagellar hook-basal body protein, FlgE/F/GFamily
IPR011491Flagellar hook protein FlgEDomain
IPR010930Flagellar basal-body/hook protein, C-terminal domainDomain
IPR037058Flagellar hook protein FlgE superfamilyHomologous Superfamily
IPR001444Flagellar basal body rod protein, N-terminalDomain
IPR037925Flagellar hook-basal body protein, FlgE/F/G-likeHomologous Superfamily