7D74 | pdb_00007d74

Cryo-EM structure of GMPPA/GMPPB complex bound to GTP (state II)


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth C]MCM_OBe7d74C1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: MCM_OBECOD (develop294)
C [auth B]MCM_OBe7d74B1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: MCM_OBECOD (develop294)
B [auth D]MCM_OBe7d74D1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: MCM_OBECOD (develop294)
AMCM_OBe7d74A1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: MCM_OBECOD (develop294)
LPsbYe7d74L1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: PsbYECOD (develop294)
KPsbYe7d74K1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: PsbYECOD (develop294)
JPsbYe7d74J1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: PsbYECOD (develop294)
IPsbYe7d74I1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: PsbYECOD (develop294)
HPsbYe7d74H1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: PsbYECOD (develop294)
GPsbYe7d74G1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: PsbYECOD (develop294)
FPsbYe7d74F1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: PsbYECOD (develop294)
ESNFe7d74E1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: SNFECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D [auth C]3.90.550.10 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (utative)
D [auth C]2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)
C [auth B]3.90.550.10 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (utative)
C [auth B]2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)
B [auth D]3.90.550.10 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (utative)
B [auth D]2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)
A3.90.550.10 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (utative)
A2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)
L3.90.550.10 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (utative)
L2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)
K3.90.550.10 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (utative)
K2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)
J3.90.550.10 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (utative)
J2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)
I3.90.550.10 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (utative)
I2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)
H3.90.550.10 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (utative)
H2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)
G3.90.550.10 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (utative)
G2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)
F3.90.550.10 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (utative)
F2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)
E3.90.550.10 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (utative)
E2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
B [auth D],
C [auth B],
D [auth C]
PF25087GMPPB C-terminal domain (GMPPB_C)GMPPB C-terminal domain- Repeat
A,
B [auth D],
C [auth B],
D [auth C]
PF00483Nucleotidyl transferase (NTP_transferase)Nucleotidyl transferase- Family
E, F, G, H, I
PF25087GMPPB C-terminal domain (GMPPB_C)GMPPB C-terminal domain- Repeat
E, F, G, H, I
PF00483Nucleotidyl transferase (NTP_transferase)Nucleotidyl transferase- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
B [auth D],
C [auth B],
D [auth C]
Mannose-1-phosphate guanyltransferase alpha
E, F, G, H, I
Mannose-1-phosphate guanyltransferase beta

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A,
B [auth D],
C [auth B],
D [auth C]
PharosQ96IJ6
E, F, G, H, I
PharosQ9Y5P6