7DL9 | pdb_00007dl9

Crystal structure of nucleoside transporter NupG

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD
Membrane Protein Annotation: mpstruc

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Ribosomal_S24e	e7dl9A1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: Ribosomal_S24e	ECOD (develop294)
B	V-set	e7dl9B1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: V-set	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.20.1250.20	Mainly Alpha	Up-down Bundle	Growth Hormone	Chain: A	CATH (utative)
B	1.20.1250.20	Mainly Alpha	Up-down Bundle	Growth Hormone	Chain: A	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF03825	Nucleoside H+ symporter (Nuc_H_symport)	Nucleoside H+ symporter	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Nucleoside permease NupG	carbohydrate derivative transmembrane transporter activity uridine transmembrane transporter activity pyrimidine nucleoside transmembrane transporter activity nucleoside transmembrane transporter activity nucleobase-containing compound transmembrane transporter activity transporter activity transmembrane transporter activity cytidine transmembrane transporter activity monoatomic cation transmembrane transporter activity proton transmembrane transporter activity solute:monoatomic cation symporter activity nucleoside:proton symporter activity secondary active transmembrane transporter activity active transmembrane transporter activity carbohydrate derivative transmembrane transporter activity uridine transmembrane transporter activity pyrimidine nucleoside transmembrane transporter activity nucleoside transmembrane transporter activity nucleobase-containing compound transmembrane transporter activity transporter activity transmembrane transporter activity cytidine transmembrane transporter activity monoatomic cation transmembrane transporter activity proton transmembrane transporter activity solute:monoatomic cation symporter activity nucleoside:proton symporter activity secondary active transmembrane transporter activity active transmembrane transporter activity solute:proton symporter activity monoatomic ion transmembrane transporter activity symporter activity	transmembrane transport localization nitrogen compound transport nucleoside transmembrane transport transport nucleoside transport cellular process carbohydrate derivative transport establishment of localization nucleobase-containing compound transport adenosine transport pyrimidine nucleoside transport pyrimidine-containing compound transmembrane transport uridine transmembrane transport transmembrane transport localization nitrogen compound transport nucleoside transmembrane transport transport nucleoside transport cellular process carbohydrate derivative transport establishment of localization nucleobase-containing compound transport adenosine transport pyrimidine nucleoside transport pyrimidine-containing compound transmembrane transport uridine transmembrane transport purine nucleoside transmembrane transport purine-containing compound transmembrane transport	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR033667	Nucleoside permease NupG	Family
A, B	IPR004740	Nucleoside:H+ symporter	Family
A, B	IPR036259	MFS transporter superfamily	Homologous Superfamily
A, B	IPR020846	Major facilitator superfamily domain	Domain

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B	OPM	Transmembrane	Alpha-helical polytopic	Major Facilitator Superfamily (MFS)	Nucleoside H+ symporter

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A, B	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A, B	MemProtMD	Annotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, B	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Major Facilitator Superfamily (MFS) Transporters	NupG nucleoside proton symporter

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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