The cryo-EM structure of human papillomavirus type 58 pseudovirus
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| F | SCOP2B Superfamily | Group I dsDNA viruses | 8071416 | 3000939 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Group I dsDNA viruses | 8071416 | 3000939 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Group I dsDNA viruses | 8071416 | 3000939 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Group I dsDNA viruses | 8071416 | 3000939 | SCOP2B (2022-06-29) |
| B [auth A] | SCOP2B Superfamily | Group I dsDNA viruses | 8071416 | 3000939 | SCOP2B (2022-06-29) |
| A [auth B] | SCOP2B Superfamily | Group I dsDNA viruses | 8071416 | 3000939 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| F | Late_protein_L1 | e7dn5F1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Late_protein_L1 | ECOD (v294.1) |
| E | e7dn5E1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: | ECOD (v294.1) | |
| D | Late_protein_L1 | e7dn5D1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Late_protein_L1 | ECOD (v294.1) |
| C | e7dn5C1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: | ECOD (v294.1) | |
| B [auth A] | Late_protein_L1 | e7dn5A1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Late_protein_L1 | ECOD (v294.1) |
| A [auth B] | e7dn5B1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: | ECOD (v294.1) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR036973 | Major capsid L1 (late) superfamily, Papillomavirus | Homologous Superfamily | |
| IPR011222 | Double-stranded DNA virus, group I, capsid | Homologous Superfamily | |
| IPR002210 | Major capsid L1 (late) protein, Papillomavirus | Family |














