7JV2
SARS-CoV-2 spike in complex with the S2H13 neutralizing antibody Fab fragment (local refinement of the receptor-binding motif and Fab variable domains)
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth H] | V-set_10 | e7jv2H1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_10 | ECOD (1.6) |
B [auth L] | V-set_3 | e7jv2L1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_3 | ECOD (1.6) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
A [auth H] | Fab S2H13, anti-SARS-CoV-2, neutralizing | VH | Homo sapiens (human) | IGHV3-7*01, IGHV3-7*02, IGHV3-7*03, IGHV3-7*04, IGHV3-7*05, IGHJ4*01, IGHJ4*02, IGHJ4*03, IGHJ3*01, IGHJ5*01, IGHJ8*01 | V-DOMAIN VH | IG | FV-HEAVY_LAMBDA | IMGT (202449-0) |
B [auth L] | Fab S2H13, anti-SARS-CoV-2, neutralizing | V-LAMBDA | Homo sapiens (human) | IGLV7-46*01, IGLJ2*01, IGLJ3*02, IGLJ1*01, IGLJ3*01 | V-DOMAIN V-LAMBDA | IG | FV-HEAVY_LAMBDA | IMGT (202449-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
A [auth H] | Heavy Chain | IGHV3 | - | sars-cov-2 spike glycoprotein | SAbDab (2024-12-13) |
B [auth L] | Light Chain | IGLV7 | Lambda | sars-cov-2 spike glycoprotein | SAbDab (2024-12-13) |