7M2V | pdb_00007m2v

Crystallographic Structure of the Rhombohedral Crystal Form of STMV Grown from Chloride

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
X [auth I]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
V [auth GG]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
T [auth H]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
P [auth G]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
O [auth KK]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
N [auth D]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
LA [auth NN]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
K [auth FX]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
I [auth JJ]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
H [auth II]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
GA [auth K]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
G [auth HH]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
F [auth M]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
E [auth J]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
DA [auth O]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
D [auth E]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
AA [auth L]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
X [auth I]	Secretin_N	e7m2vI1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
V [auth GG]	Secretin_N	e7m2vGG1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
T [auth H]	Secretin_N	e7m2vH1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
P [auth G]	Secretin_N	e7m2vG1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
O [auth KK]	Secretin_N	e7m2vKK1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
N [auth D]	Secretin_N	e7m2vD1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
LA [auth NN]	Secretin_N	e7m2vNN1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
K [auth FX]	Secretin_N	e7m2vFX1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
I [auth JJ]	Secretin_N	e7m2vJJ1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
H [auth II]	Secretin_N	e7m2vII1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
GA [auth K]	Secretin_N	e7m2vK1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
G [auth HH]	Secretin_N	e7m2vHH1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
F [auth M]	Secretin_N	e7m2vM1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
E [auth J]	Secretin_N	e7m2vJ1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
DA [auth O]	Secretin_N	e7m2vO1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
D [auth E]	Secretin_N	e7m2vE1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
C	Secretin_N	e7m2vC1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
B	Secretin_N	e7m2vB1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
AA [auth L]	Secretin_N	e7m2vL1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
A	Secretin_N	e7m2vA1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
BA [auth TT], EA [auth P], HA [auth Y], JA [auth ff], L [auth S], BA [auth TT], EA [auth P], HA [auth Y], JA [auth ff], L [auth S], NA [auth zz], Q [auth V], S [auth k], W [auth U], Y [auth X]	RNA (5'-R(PAPAPAPAPAPAPAPAPAPAPAPA)-3')	-	-	-
CA [auth i], FA [auth e], IA [auth n], J [auth QQ], KA [auth xx], CA [auth i], FA [auth e], IA [auth n], J [auth QQ], KA [auth xx], M [auth h], MA [auth yy], R [auth ww], U [auth T], Z [auth m]	RNA (5'-R(PUPUPUPUPUPUPUPUPUPUPUPU)-3')	-	-	-
A, AA [auth L], B, C, D [auth E], A, AA [auth L], B, C, D [auth E], DA [auth O], E [auth J], F [auth M], G [auth HH], GA [auth K], H [auth II], I [auth JJ], K [auth FX], LA [auth NN], N [auth D], O [auth KK], P [auth G], T [auth H], V [auth GG], X [auth I]	Coat protein	structural molecule activity	-	viral capsid virion component

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth L], B, C, D [auth E], A, AA [auth L], B, C, D [auth E], DA [auth O], E [auth J], F [auth M], G [auth HH], GA [auth K], H [auth II], I [auth JJ], K [auth FX], LA [auth NN], N [auth D], O [auth KK], P [auth G], T [auth H], V [auth GG], X [auth I]	IPR037164	Satellite virus coat domain superfamily	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.