Murine supercomplex CIII2CIV in the mature unlocked conformation
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| F | SCOP2 Family | 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8105496 | 4002070 | SCOP2 (2022-06-29) |
| F | SCOP2 Superfamily | 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8105497 | 3000797 | SCOP2 (2022-06-29) |
| Q [auth R] | SCOP2B Superfamily | Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8105495 | 3000770 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8105495 | 3000770 | SCOP2B (2022-06-29) |
| S [auth U] | SCOP2B Superfamily | Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8105489 | 3000779 | SCOP2B (2022-06-29) |
| I [auth J] | SCOP2B Superfamily | Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8105489 | 3000779 | SCOP2B (2022-06-29) |
| W [auth a] | SCOP2 Family | Cytochrome c oxidase subunit I-like | 8105416 | 4001989 | SCOP2 (2022-06-29) |
| W [auth a] | SCOP2 Superfamily | Cytochrome c oxidase subunit I-like | 8105417 | 3000653 | SCOP2 (2022-06-29) |
| Y [auth c] | SCOP2B Superfamily | Cytochrome c oxidase subunit III-like | 8105419 | 3000671 | SCOP2B (2022-06-29) |
| BA [auth f] | SCOP2B Superfamily | Rubredoxin-like | 8105435 | 3001257 | SCOP2B (2022-06-29) |
| DA [auth h] | SCOP2 Family | Cytochrome c oxidase subunit h | 8105444 | 4000996 | SCOP2 (2022-06-29) |
| DA [auth h] | SCOP2 Superfamily | Cytochrome c oxidase subunit h | 8105445 | 3000395 | SCOP2 (2022-06-29) |
| EA [auth i] | SCOP2B Superfamily | Mitochondrial cytochrome c oxidase subunit VIc | 8105491 | 3000598 | SCOP2B (2022-06-29) |
| FA [auth k] | SCOP2 Family | Mitochondrial cytochrome c oxidase subunit VIIb | 8105446 | 4001959 | SCOP2 (2022-06-29) |
| FA [auth k] | SCOP2 Superfamily | Mitochondrial cytochrome c oxidase subunit VIIb | 8105447 | 3000613 | SCOP2 (2022-06-29) |
| GA [auth l] | SCOP2 Family | Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) | 8105432 | 4001966 | SCOP2 (2022-06-29) |
| GA [auth l] | SCOP2 Superfamily | Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) | 8105433 | 3000624 | SCOP2 (2022-06-29) |
| HA [auth m] | SCOP2 Family | Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) | 8105442 | 4001973 | SCOP2 (2022-06-29) |
| HA [auth m] | SCOP2 Superfamily | Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) | 8105443 | 3000633 | SCOP2 (2022-06-29) |
| R [auth S] | SCOP2B Superfamily | Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8105459 | 3000806 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8105459 | 3000806 | SCOP2B (2022-06-29) |
| CA [auth g] | SCOP2B Superfamily | Mitochondrial cytochrome c oxidase subunit VIa | 8105441 | 3000592 | SCOP2B (2022-06-29) |
| AA [auth e] | SCOP2 Family | Cytochrome c oxidase subunit E | 8105430 | 4001366 | SCOP2 (2022-06-29) |
| AA [auth e] | SCOP2 Superfamily | Cytochrome c oxidase subunit E | 8105431 | 3001402 | SCOP2 (2022-06-29) |
| Z [auth d] | SCOP2 Family | Mitochondrial cytochrome c oxidase subunit IV | 8105436 | 4001940 | SCOP2 (2022-06-29) |
| Z [auth d] | SCOP2 Superfamily | Mitochondrial cytochrome c oxidase subunit IV | 8105437 | 3000582 | SCOP2 (2022-06-29) |
| T [auth V] | SCOP2 Family | Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8105492 | 4002065 | SCOP2 (2022-06-29) |
| T [auth V] | SCOP2 Superfamily | Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8105493 | 3000787 | SCOP2 (2022-06-29) |
| J [auth K] | SCOP2B Superfamily | Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8105493 | 3000787 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| K [auth L] | e7o3cL1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| A | e7o3cA1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| C | e7o3cC1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| M [auth N] | e7o3cN1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| N [auth O] | e7o3cO1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| D | e7o3cD1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| O [auth P] | e7o3cP1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| E | e7o3cE1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| F | e7o3cF1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| P [auth Q] | e7o3cQ1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| Q [auth R] | e7o3cR1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| G | e7o3cG1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| S [auth U] | e7o3cU1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| I [auth J] | e7o3cJ1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| W [auth a] | e7o3ca1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| X [auth b] | e7o3cb1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| Y [auth c] | e7o3cc1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| BA [auth f] | e7o3cf1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| DA [auth h] | e7o3ch1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| EA [auth i] | e7o3ci1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| FA [auth k] | e7o3ck1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| GA [auth l] | e7o3cl1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| HA [auth m] | e7o3cm1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| R [auth S] | e7o3cS1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| H | e7o3cH1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| L [auth M] | e7o3cM1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| B | e7o3cB1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| CA [auth g] | e7o3cg1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| AA [auth e] | e7o3ce1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| Z [auth d] | e7o3cd1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| U [auth T] | e7o3cT1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| T [auth V] | e7o3cV1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) | |
| J [auth K] | e7o3cK1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Secretin_N | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| K [auth L] | 3.30.830.10 | Alpha Beta | 2-Layer Sandwich | Cytochrome Bc1 Complex | Chain A, domain 1 | CATH (utative) |
| A | 3.30.830.10 | Alpha Beta | 2-Layer Sandwich | Cytochrome Bc1 Complex | Chain A, domain 1 | CATH (utative) |
| O [auth P] | 2.102.10.10 | Mainly Beta | 3-layer Sandwich | Rieske Iron-sulfur Protein | Rieske [2Fe-2S] iron-sulphur domain | CATH (utative) |
| E | 2.102.10.10 | Mainly Beta | 3-layer Sandwich | Rieske Iron-sulfur Protein | Rieske [2Fe-2S] iron-sulphur domain | CATH (utative) |
| W [auth a] | 1.20.210.10 | Mainly Alpha | Up-down Bundle | Cytochrome C Oxidase | Chain A | CATH (utative) |
| X [auth b] | 1.10.287.90 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | CATH (utative) | |
| X [auth b] | 2.60.40.420 | Mainly Beta | Sandwich | Immunoglobulin-like | Cupredoxins - blue copper proteins | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A, K [auth L] | PF05193 | Peptidase M16 inactive domain (Peptidase_M16_C) | Peptidase M16 inactive domain | Peptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1]. | Domain |
| A, K [auth L] | PF00675 | Insulinase (Peptidase family M16) (Peptidase_M16) | Insulinase (Peptidase family M16) | - | Family |
| A, K [auth L] | PF00115 | Cytochrome C and Quinol oxidase polypeptide I (COX1) | Cytochrome C and Quinol oxidase polypeptide I | - | Family |
| C, M [auth N] | PF00032 | Cytochrome b(C-terminal)/b6/petD (Cytochrom_B_C) | Cytochrome b(C-terminal)/b6/petD | Domain | |
| C, M [auth N] | PF00033 | Cytochrome b/b6/petB (Cytochrome_B) | Cytochrome b/b6/petB | Domain | |
| C, M [auth N] | PF00510 | Cytochrome c oxidase subunit III (COX3) | Cytochrome c oxidase subunit III | Domain | |
| D, N [auth O] | PF02936 | Cytochrome c oxidase subunit IV (COX4) | Cytochrome c oxidase subunit IV | - | Family |
| D, N [auth O] | PF02167 | Cytochrome C1 family (Cytochrom_C1) | Cytochrome C1 family | - | Family |
| E, O [auth P] | PF02921 | Ubiquinol cytochrome reductase transmembrane region (UCR_TM) | Ubiquinol cytochrome reductase transmembrane region | - | Family |
| E, O [auth P] | PF00355 | Rieske [2Fe-2S] domain (Rieske) | Rieske [2Fe-2S] domain | The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ... | Domain |
| G, Q [auth R] | PF02939 | UcrQ family (UcrQ) | UcrQ family | - | Family |
| I [auth J], S [auth U] | PF05365 | Cytochrome b-c1 complex subunit 9 (UCR_UQCRX_QCR9) | Cytochrome b-c1 complex subunit 9 | - | Family |
| V [auth I] | PF02937 | Cytochrome c oxidase subunit VIc (COX6C) | Cytochrome c oxidase subunit VIc | - | Family |
| H, R [auth S] | PF02320 | Ubiquinol-cytochrome C reductase hinge protein (UCR_hinge) | Ubiquinol-cytochrome C reductase hinge protein | The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex [1]. This Pfam family represents the 'hinge' protein of the complex which is thought to mediate formation of the cytochrome c1 and cytochrome c ... | Domain |
| H, R [auth S] | PF02297 | Cytochrome oxidase c subunit VIb (COX6B) | Cytochrome oxidase c subunit VIb | Cytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of the potentially heme-binding subunit IVb of the oxidase. | Domain |
| B, L [auth M] | PF00116 | Cytochrome C oxidase subunit II, periplasmic domain (COX2) | Cytochrome C oxidase subunit II, periplasmic domain | Domain | |
| B, L [auth M] | PF05193 | Peptidase M16 inactive domain (Peptidase_M16_C) | Peptidase M16 inactive domain | Peptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1]. | Domain |
| B, L [auth M] | PF02285 | Cytochrome oxidase c subunit VIII (COX8) | Cytochrome oxidase c subunit VIII | - | Family |
| B, L [auth M] | PF02790 | Cytochrome C oxidase subunit II, transmembrane domain (COX2_TM) | Cytochrome C oxidase subunit II, transmembrane domain | - | Family |
| B, L [auth M] | PF00675 | Insulinase (Peptidase family M16) (Peptidase_M16) | Insulinase (Peptidase family M16) | - | Family |
| U [auth T] | PF09165 | Ubiquinol-cytochrome c reductase 8 kDa, N-terminal (Ubiq-Cytc-red_N) | Ubiquinol-cytochrome c reductase 8 kDa, N-terminal | Members of this family adopt a structure consisting of many antiparallel beta sheets, with few alpha helices, in a non-globular arrangement. They are required for proper functioning of the respiratory chain [1]. | Domain |
| J [auth K], T [auth V] | PF08997 | Ubiquinol-cytochrome C reductase complex, 6.4kD protein (UCR_6-4kD) | Ubiquinol-cytochrome C reductase complex, 6.4kD protein | The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is an essential component of the mitochondrial cellular respiratory chain. This family represents the 6.4kD protein, which may be closely linked to the iron-sulphur protein in the ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Alpha-helical polytopic | Electron transport chain complex IV (cytochrome c oxidase) | Respiratory supercomplexes III-IV |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| PDBTM | Annotated as membrane protein by PDBTM |














