7PJ6

Crystal structure of catalytic domain of LytB (E585Q) from Streptococcus pneumoniae in complex with NAG-NAM-NAG-NAM-NAG peptidolycan analogue


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth AAA]EUF07572e7pj6AAA1 A: beta barrelsX: SH3H: SH3T: SH3F: EUF07572ECOD (1.6)
A [auth AAA]LytD_likee7pj6AAA3 A: beta meandersX: WW domain-likeH: Peptidoglycan hydrolase LytB WW-like domain (From Topology)T: Peptidoglycan hydrolase LytB WW-like domainF: LytD_likeECOD (1.6)
A [auth AAA]Glucosaminidasee7pj6AAA2 A: a+b complex topologyX: Lysozyme-like (From Homology)H: Lysozyme-likeT: Lysozyme-likeF: GlucosaminidaseECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth AAA]PF17890Peptidoglycan hydrolase LytB WW-like domain (WW_like)Peptidoglycan hydrolase LytB WW-like domainStructural analysis revealed that the catalytic domain of LytB consists of three structurally independent modules: SH3b, WW domain-like, and the glycoside hydrolase family 73 (GH73). This entry is the WW like domain found in endo-beta-N-acetylglucosa ...Domain
A [auth AAA]PF01832Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase (Glucosaminidase)Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidaseThis family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J Swiss:P75942 that has been shown to hydrolyse peptidoglycan [1]. Domain