7QO5 | pdb_00007qo5

26S proteasome Rpt1-RK -Ubp6-UbVS complex in the si state

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
H [auth h]SCOP2B SuperfamilyClass II glutamine amidotransferases 8036787 3000131 SCOP2B (2022-06-29)
V [auth 1]SCOP2B SuperfamilyClass II glutamine amidotransferases 8036787 3000131 SCOP2B (2022-06-29)
U [auth G]SCOP2B SuperfamilyClass II glutamine amidotransferases 8079169 3000131 SCOP2B (2022-06-29)
G [auth g]SCOP2B SuperfamilyClass II glutamine amidotransferases 8079169 3000131 SCOP2B (2022-06-29)
T [auth F]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064066 3000131 SCOP2B (2022-06-29)
F [auth f]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064066 3000131 SCOP2B (2022-06-29)
S [auth E]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064026 3000131 SCOP2B (2022-06-29)
E [auth e]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064026 3000131 SCOP2B (2022-06-29)
R [auth D]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064012 3000131 SCOP2B (2022-06-29)
D [auth d]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064012 3000131 SCOP2B (2022-06-29)
WA [auth 9]SCOP2B SuperfamilyUbiquitin-like 8101457 3000157 SCOP2B (2022-06-29)
VA [auth 8]SCOP2B SuperfamilyCysteine proteinases 8041362 3001808 SCOP2B (2022-06-29)
Q [auth C]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064020 3000131 SCOP2B (2022-06-29)
C [auth c]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064020 3000131 SCOP2B (2022-06-29)
NA [auth U]SCOP2B SuperfamilyEIF3 subunit F C-terminal domain-like 8053273 3002167 SCOP2B (2022-06-29)
NA [auth U]SCOP2B SuperfamilyJAB1/MPN domain-like 8053272 3001105 SCOP2B (2022-06-29)
MA [auth R]SCOP2B SuperfamilyWinged helix DNA-binding domain 8057044 3000034 SCOP2B (2022-06-29)
MA [auth R]SCOP2B SuperfamilyTPR-like 8057042 3001345 SCOP2B (2022-06-29)
B [auth b]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064048 3000131 SCOP2B (2022-06-29)
P [auth B]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064048 3000131 SCOP2B (2022-06-29)
GA [auth Y]SCOP2B SuperfamilyDSS1/SEM1 protein family 8053395 3002183 SCOP2B (2022-06-29)
FA [auth X]SCOP2B SuperfamilyPH domain-like 8093403 3000134 SCOP2B (2022-06-29)
DA [auth V]SCOP2B SuperfamilyJAB1/MPN domain-like 8053248 3001105 SCOP2B (2022-06-29)
Z [auth 5]SCOP2B SuperfamilyClass II glutamine amidotransferases 8079504 3000131 SCOP2B (2022-06-29)
L [auth l]SCOP2B SuperfamilyClass II glutamine amidotransferases 8079504 3000131 SCOP2B (2022-06-29)
O [auth A]SCOP2B SuperfamilyClass II glutamine amidotransferases 8036842 3000131 SCOP2B (2022-06-29)
A [auth a]SCOP2B SuperfamilyClass II glutamine amidotransferases 8036842 3000131 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
W [auth 2]tRNA-synt_2de7qo521 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: tRNA-synt_2dECOD (v294.1)
I [auth i]Fer2_4e7qo5i1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
H [auth h]Fer2_4e7qo5h1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
V [auth 1]tRNA-synt_2de7qo511 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: tRNA-synt_2dECOD (v294.1)
U [auth G]tRNA-synt_2de7qo5G1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: tRNA-synt_2dECOD (v294.1)
G [auth g]Fer2_4e7qo5g1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
T [auth F]tRNA-synt_2de7qo5F1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: tRNA-synt_2dECOD (v294.1)
F [auth f]Fer2_4e7qo5f1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
S [auth E]tRNA-synt_2de7qo5E1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: tRNA-synt_2dECOD (v294.1)
E [auth e]tRNA-synt_2de7qo5e1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: tRNA-synt_2dECOD (v294.1)
R [auth D]tRNA-synt_2de7qo5D1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: tRNA-synt_2dECOD (v294.1)
D [auth d]Fer2_4e7qo5d1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
WA [auth 9]Fer2_4e7qo591 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
VA [auth 8]Fer2_4e7qo581 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
SA [auth L]Fer2_4e7qo5L1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
RA [auth K]Fer2_4e7qo5K1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
Q [auth C]tRNA-synt_2de7qo5C1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: tRNA-synt_2dECOD (v294.1)
C [auth c]Fer2_4e7qo5c1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
QA [auth I]Fer2_4e7qo5I1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
PA [auth H]e7qo5H01 A: a/b three-layered sandwichesX: Rossmann-likeH: all-alpha NTP pyrophosphatasesT: Hypothetical protein AF_0060F:ECOD (v294.1)
OA [auth O]Fer2_4e7qo5O1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
NA [auth U]Fer2_4e7qo5U1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
MA [auth R]Fer2_4e7qo5R1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
LA [auth Q]Fer2_4e7qo5Q1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
KA [auth P]Fer2_4e7qo5P1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
JA [auth S]Fer2_4e7qo5S1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
IA [auth N]Fer2_4e7qo5N1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
HA [auth Z]Fer2_4e7qo5Z1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
B [auth b]Fer2_4e7qo5b1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
P [auth B]tRNA-synt_2de7qo5B1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: tRNA-synt_2dECOD (v294.1)
FA [auth X]Fer2_4e7qo5X1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
EA [auth T]Fer2_4e7qo5T1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
DA [auth V]Fer2_4e7qo5V1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
CA [auth W]Fer2_4e7qo5W1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
N [auth n]Fer2_4e7qo5n1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
BA [auth 7]tRNA-synt_2de7qo571 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: tRNA-synt_2dECOD (v294.1)
M [auth m]Fer2_4e7qo5m1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
AA [auth 6]tRNA-synt_2de7qo561 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: tRNA-synt_2dECOD (v294.1)
Z [auth 5]tRNA-synt_2de7qo551 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: tRNA-synt_2dECOD (v294.1)
L [auth l]Fer2_4e7qo5l1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
K [auth k]Fer2_4e7qo5k1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
Y [auth 4]tRNA-synt_2de7qo541 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: tRNA-synt_2dECOD (v294.1)
J [auth j]Fer2_4e7qo5j1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer2_4ECOD (v294.1)
X [auth 3]tRNA-synt_2de7qo531 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: tRNA-synt_2dECOD (v294.1)
O [auth A]tRNA-synt_2de7qo5A1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: tRNA-synt_2dECOD (v294.1)
A [auth a]tRNA-synt_2de7qo5a1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: tRNA-synt_2dECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth i],
W [auth 2]		PF12465Proteasome beta subunits C terminal (Pr_beta_C)Proteasome beta subunits C terminal- Family
G [auth g],
U [auth G]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
G [auth g],
U [auth G]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
F [auth f],
T [auth F]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
F [auth f],
T [auth F]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
E [auth e],
S [auth E]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
E [auth e],
S [auth E]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
D [auth d],
R [auth D]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
D [auth d],
R [auth D]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
WA [auth 9]PF00240Ubiquitin family (ubiquitin)Ubiquitin familyThis family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ...This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry a distinctive five-residue motif termed the proteasome-interacting motif (PIM), which may have a biologically significant role in protein delivery to proteasomes and recruitment of proteasomes to transcription sites [5].
Domain
VA [auth 8]PF00443Ubiquitin carboxyl-terminal hydrolase (UCH)Ubiquitin carboxyl-terminal hydrolase- Family
UA [auth J]PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
UA [auth J]PF16450Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C)Proteasomal ATPase OB C-terminal domainThis is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] Domain
UA [auth J]PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
UA [auth J]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
TA [auth M]PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
TA [auth M]PF16450Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C)Proteasomal ATPase OB C-terminal domainThis is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] Domain
TA [auth M]PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
TA [auth M]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
SA [auth L]PF16450Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C)Proteasomal ATPase OB C-terminal domainThis is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] Domain
SA [auth L]PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
SA [auth L]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
RA [auth K]PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
RA [auth K]PF16450Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C)Proteasomal ATPase OB C-terminal domainThis is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] Domain
RA [auth K]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
C [auth c],
Q [auth C]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
C [auth c],
Q [auth C]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
QA [auth I]PF12465Proteasome beta subunits C terminal (Pr_beta_C)Proteasome beta subunits C terminal- Family
QA [auth I]PF16450Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C)Proteasomal ATPase OB C-terminal domainThis is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] Domain
QA [auth I]PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
QA [auth I]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
PA [auth H]PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
PA [auth H]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
OA [auth O]PF18261Rpn9 C-terminal helix (Rpn9_C)Rpn9 C-terminal helix- Family
OA [auth O]PF22037PSD13 N-terminal repeats (PSD13_N)PSD13 N-terminal repeats- Repeat
OA [auth O]PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. Domain
NA [auth U]PF13012Maintenance of mitochondrial structure and function (MitMem_reg)Maintenance of mitochondrial structure and function- Family
NA [auth U]PF01398JAB1/Mov34/MPN/PAD-1 ubiquitin protease (JAB)JAB1/Mov34/MPN/PAD-1 ubiquitin proteaseProteins with this domain are found in proteasome regulatory subunits, eukaryotic initiation factor 3 (eIF3) subunits and regulators of transcription factors. This domain is known as the MPN domain [3] and PAD-1-like domain [4], JABP1 domain [5] or J ...Proteins with this domain are found in proteasome regulatory subunits, eukaryotic initiation factor 3 (eIF3) subunits and regulators of transcription factors. This domain is known as the MPN domain [3] and PAD-1-like domain [4], JABP1 domain [5] or JAMM domain [7]. These are metalloenzymes that function as the ubiquitin isopeptidase/ deubiquitinase in the ubiquitin-based signalling and protein turnover pathways in eukaryotes [7]. Versions of the domain in prokaryotic cognates of the ubiquitin-modification pathway are shown to have a similar role, and the archaeal protein from Haloferax volcanii is found to cleave ubiquitin-like small archaeal modifier proteins (SAMP1/2) from protein conjugates [8,9].
Domain
MA [auth R]PF2115426S proteasome regulatory subunit RPN7/PSMD6 C-terminal helix (RPN7_PSMD6_C)26S proteasome regulatory subunit RPN7/PSMD6 C-terminal helixRPN7/PSDM6 are regulatory subunits from the 26S proteasome. This entry represents the C-terminal helix. Domain
MA [auth R]PF1060226S proteasome subunit RPN7 (RPN7)26S proteasome subunit RPN7- Repeat
MA [auth R]PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. Domain
LA [auth Q]PF1805526S proteasome regulatory subunit RPN6 N-terminal domain (RPN6_N)26S proteasome regulatory subunit RPN6 N-terminal domainThis is the N-terminal domain found in RPN6 proteins (26S proteasome regulatory subunit). The 26S proteasome holocomplex consists of a 28-subunit barrel-shaped core particle (CP) in the center capped at the top and bottom by 19-subunit regulatory par ...This is the N-terminal domain found in RPN6 proteins (26S proteasome regulatory subunit). The 26S proteasome holocomplex consists of a 28-subunit barrel-shaped core particle (CP) in the center capped at the top and bottom by 19-subunit regulatory particles (RPs). The CP forms the catalytic chamber and the RP is formed from two subcomplexes known as the lid and the base [1]. The lid comprises nine Rpn subunits in yeast (Rpn3/5/6/7/8/9/11/12/15) and the base comprises three Rpn subunits (Rpn1/2/13) and six ATPases (Rpt1-6) [2]. Phosphorylation of Rpn6 enhances proteasome ATPase activity and promotes the formation of doubly capped (30S) proteasome, hence accelerating the degradation of short-lived proteins [3].
Domain
LA [auth Q]PF1850326S proteasome subunit RPN6 C-terminal helix domain (RPN6_C_helix)26S proteasome subunit RPN6 C-terminal helix domainThis is the C-terminal helix domain found in RPN6, a component of the 26S proteasome. The C-terminal helices are essential for lid assembly [1, 2]. Domain
LA [auth Q]PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. Domain
KA [auth P]PF1809826S proteasome regulatory subunit RPN5 C-terminal domain (RPN5_C)26S proteasome regulatory subunit RPN5 C-terminal domainThis is the C-terminal domain of the 26S proteasome regulatory subunit RPN5 proteins.This helical domain can be found adjacent to Pfam:PF01399. The 26S proteasome is the major ATP-dependent protease in eukaryotes. Three subcomplexes form this degrada ...This is the C-terminal domain of the 26S proteasome regulatory subunit RPN5 proteins.This helical domain can be found adjacent to Pfam:PF01399. The 26S proteasome is the major ATP-dependent protease in eukaryotes. Three subcomplexes form this degradation machine: the lid, the base, and the core. The helices found at the C terminus of each lid subunit form a helical bundle that directs the ordered self-assembly of the lid subcomplex. This domain which comprises the tail of RPN5 along with the tail of Rpn9, are important for Rpn12 binding to the lid [1].
Domain
KA [auth P]PF22241PSMD12/CSN4, N-terminal (PSMD12-CSN4_N)PSMD12/CSN4, N-terminal- Repeat
KA [auth P]PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. Domain
JA [auth S]PF08375Proteasome regulatory subunit C-terminal (Rpn3_C)Proteasome regulatory subunit C-terminal- Family
JA [auth S]PF25573PSMD3-like, N-terminal TPR repeats (TPR_PSMD3_N)PSMD3-like, N-terminal TPR repeats- Repeat
JA [auth S]PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. Domain
IA [auth N]PF13646HEAT repeats (HEAT_2)HEAT repeats- Repeat
IA [auth N]PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
IA [auth N]PF1800426S proteasome regulatory subunit RPN2 C-terminal domain (RPN2_C)26S proteasome regulatory subunit RPN2 C-terminal domainThis is the C-terminal domain found in S. cerevisiae Rpn2 (26S proteasome regulatory subunit RPN2) as well as other eukaryotic species. A study revealed that the C-terminal 52 residues of the Rpn2 C-terminal domain are responsible for mediating inter ...This is the C-terminal domain found in S. cerevisiae Rpn2 (26S proteasome regulatory subunit RPN2) as well as other eukaryotic species. A study revealed that the C-terminal 52 residues of the Rpn2 C-terminal domain are responsible for mediating interactions with the ubiquitin-binding subunit Rpn13. Futhermore, the extreme C-terminal 20 or 21 residues of Rpn2 (926-945 or 925-945) of S. cerevisiae, were shown to be equally effective at binding Rpn13. Multiple sequence alignments indicate that Rpn2 orthologs are highly conserved in this C-terminal region and share characteristic acidic, aromatic, and proline residues, suggesting a common function. In the structure of Rpn2 from S. cerevisiae , this region is exposed and disordered, and is thus accessible for associating with Rpn13. The Rpn2 binding surface of human Rpn13 has been mapped by nuclear magnetic resonance titration to one surface of its Pru domain [1].
Domain
IA [auth N]PF2150526S proteasome subunit RPN2, N-terminal domain (RPN2_N)26S proteasome subunit RPN2, N-terminal domain- Repeat
IA [auth N]PF01851Proteasome/cyclosome repeat (PC_rep)Proteasome/cyclosome repeat- Repeat
HA [auth Z]PF17781RPN1 N-terminal domain (RPN1_RPN2_N)RPN1 N-terminal domain- Repeat
HA [auth Z]PF01851Proteasome/cyclosome repeat (PC_rep)Proteasome/cyclosome repeat- Repeat
HA [auth Z]PF1805126S proteasome non-ATPase regulatory subunit RPN1 C-terminal (RPN1_C)26S proteasome non-ATPase regulatory subunit RPN1 C-terminalThis is the C-terminal domain found in RPN1 proteins (26S proteasome non-ATPase regulatory subunit 2). The 26S proteasome holocomplex consists of a 28-subunit barrel-shaped core particle (CP) in the center capped at the top and bottom by 19-subunit ...This is the C-terminal domain found in RPN1 proteins (26S proteasome non-ATPase regulatory subunit 2). The 26S proteasome holocomplex consists of a 28-subunit barrel-shaped core particle (CP) in the center capped at the top and bottom by 19-subunit regulatory particles (RPs). The CP forms the catalytic chamber and the RP is formed from two subcomplexes known as the lid and the base [1]. The lid comprises nine Rpn subunits in yeast (Rpn3/5/6/7/8/9/11/12/15) and the base comprises three Rpn subunits (Rpn1/2/13) and six ATPases (Rpt1-6) [2].
Domain
B [auth b],
P [auth B]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
B [auth b],
P [auth B]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
GA [auth Y]PF05160DSS1/SEM1 family (DSS1_SEM1)DSS1/SEM1 family- Family
FA [auth X]PF04683Proteasome complex subunit Rpn13, Pru domain (Rpn13_ADRM1_Pru)Proteasome complex subunit Rpn13, Pru domainThis family was thought originally to be involved in cell-adhesion [1,2], but the members are now known to be proteasome subunit Rpn13, a novel ubiquitin receptor. The 26S proteasome is a huge macromolecular protein-degradation machine consisting of ...This family was thought originally to be involved in cell-adhesion [1,2], but the members are now known to be proteasome subunit Rpn13, a novel ubiquitin receptor. The 26S proteasome is a huge macromolecular protein-degradation machine consisting of a proteolytically active 20S core, in the form of four disc-like proteins, and one or two 19S regulatory particles. The regulatory particle(s) sit on the top and or bottom of the core, de-ubiquitinate the substrate peptides, unfold them and guide them into the narrow channel through the centre of the core. Rpn13 and its homologues dock onto the regulatory particle through the N-terminal region which binds Rpn2. The C-terminal part of the domain binds de-ubiquitinating enzyme Uch37/UCHL5 and enhances its isopeptidase activity. Rpn13 binds ubiquitin via a conserved amino-terminal region called the pleckstrin-like receptor for ubiquitin, termed Pru, domain [4]. The domain forms two contiguous anti-parallel beta-sheets with a configuration similar to the pleckstrin-homology domain (PHD) fold [5]. Rpn13's ability to bind ubiquitin and the proteasome subunit Rpn2/S1 simultaneously supports evidence of its role as a ubiquitin receptor. Finally, when complexed to di-ubiquitin, via the Pru, and Uch37 via the C-terminal part, it frees up the distal ubiquitin for de-ubiquitination by the Uch37 [5].
Domain
EA [auth T]PF10075CSN8/PSMD8/EIF3K family (CSN8_PSD8_EIF3K)CSN8/PSMD8/EIF3K family- Family
DA [auth V]PF2359426S proteasome regulatory subunit RPN11 C-terminal domain (RPN11_C)26S proteasome regulatory subunit RPN11 C-terminal domainThis entry represents the C-terminal helical region of 26S proteosomal subunits. This region is involved in forming a helical bundle with other RPN subunits to help with assembly of the proteosome lid [1]. Domain
DA [auth V]PF01398JAB1/Mov34/MPN/PAD-1 ubiquitin protease (JAB)JAB1/Mov34/MPN/PAD-1 ubiquitin proteaseProteins with this domain are found in proteasome regulatory subunits, eukaryotic initiation factor 3 (eIF3) subunits and regulators of transcription factors. This domain is known as the MPN domain [3] and PAD-1-like domain [4], JABP1 domain [5] or J ...Proteins with this domain are found in proteasome regulatory subunits, eukaryotic initiation factor 3 (eIF3) subunits and regulators of transcription factors. This domain is known as the MPN domain [3] and PAD-1-like domain [4], JABP1 domain [5] or JAMM domain [7]. These are metalloenzymes that function as the ubiquitin isopeptidase/ deubiquitinase in the ubiquitin-based signalling and protein turnover pathways in eukaryotes [7]. Versions of the domain in prokaryotic cognates of the ubiquitin-modification pathway are shown to have a similar role, and the archaeal protein from Haloferax volcanii is found to cleave ubiquitin-like small archaeal modifier proteins (SAMP1/2) from protein conjugates [8,9].
Domain
CA [auth W]PF13519von Willebrand factor type A domain (VWA_2)von Willebrand factor type A domainDomain
BA [auth 7],
N [auth n]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
AA [auth 6],
M [auth m]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
K [auth k],
Y [auth 4]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
J [auth j],
X [auth 3]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
A [auth a],
O [auth A]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
A [auth a],
O [auth A]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth i],
W [auth 2]		Proteasome subunit beta type-2
H [auth h],
V [auth 1]		Proteasome subunit beta type-1
G [auth g],
U [auth G]		Probable proteasome subunit alpha type-7
F [auth f],
T [auth F]		Proteasome subunit alpha type-6-
E [auth e],
S [auth E]		Proteasome subunit alpha type-5-
D [auth d],
R [auth D]		Proteasome subunit alpha type-4-
WA [auth 9]Polyubiquitin-B
VA [auth 8]Ubiquitin carboxyl-terminal hydrolase 6
UA [auth J]26S proteasome regulatory subunit 8 homolog
TA [auth M]26S proteasome regulatory subunit 6A
SA [auth L]26S proteasome subunit RPT4
RA [auth K]26S proteasome regulatory subunit 6B homolog
C [auth c],
Q [auth C]		Proteasome subunit alpha type-3-
QA [auth I]26S proteasome regulatory subunit 4 homolog
PA [auth H]26S proteasome regulatory subunit 7 homolog
OA [auth O]26S proteasome regulatory subunit RPN9
NA [auth U]26S proteasome regulatory subunit RPN8
MA [auth R]26S proteasome regulatory subunit RPN7
LA [auth Q]26S proteasome regulatory subunit RPN6
KA [auth P]26S proteasome regulatory subunit RPN5-
JA [auth S]26S proteasome regulatory subunit RPN3
IA [auth N]26S proteasome regulatory subunit RPN2
HA [auth Z]26S proteasome regulatory subunit RPN1
B [auth b],
P [auth B]		Proteasome subunit alpha type-2-
GA [auth Y]26S proteasome complex subunit SEM1
FA [auth X]26S proteasome regulatory subunit RPN13
EA [auth T]26S proteasome regulatory subunit RPN12-
DA [auth V]Ubiquitin carboxyl-terminal hydrolase RPN11
CA [auth W]26S proteasome regulatory subunit RPN10
BA [auth 7],
N [auth n]		Proteasome subunit beta type-7-
AA [auth 6],
M [auth m]		Proteasome subunit beta type-6-
L [auth l],
Z [auth 5]		Proteasome subunit beta type-5
K [auth k],
Y [auth 4]		Proteasome subunit beta type-4
J [auth j],
X [auth 3]		Proteasome subunit beta type-3
A [auth a],
O [auth A]		Proteasome subunit alpha type-1-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth i],
W [auth 2]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
I [auth i],
W [auth 2]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
I [auth i],
W [auth 2]		IPR024689Proteasome beta subunit, C-terminalDomain
I [auth i],
W [auth 2]		IPR023333Proteasome B-type subunitFamily
I [auth i],
W [auth 2]		IPR001353Proteasome, subunit alpha/betaFamily
I [auth i],
W [auth 2]		IPR000243Peptidase T1A, proteasome beta-subunitFamily
H [auth h],
V [auth 1]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
H [auth h],
V [auth 1]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
H [auth h],
V [auth 1]		IPR023333Proteasome B-type subunitFamily
H [auth h],
V [auth 1]		IPR001353Proteasome, subunit alpha/betaFamily
H [auth h],
V [auth 1]		IPR000243Peptidase T1A, proteasome beta-subunitFamily
G [auth g],
U [auth G]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
G [auth g],
U [auth G]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
G [auth g],
U [auth G]		IPR050115Proteasome subunit alphaFamily
G [auth g],
U [auth G]		IPR023332Proteasome alpha-type subunitFamily
G [auth g],
U [auth G]		IPR001353Proteasome, subunit alpha/betaFamily
F [auth f],
T [auth F]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
F [auth f],
T [auth F]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
F [auth f],
T [auth F]		IPR050115Proteasome subunit alphaFamily
F [auth f],
T [auth F]		IPR023332Proteasome alpha-type subunitFamily
F [auth f],
T [auth F]		IPR001353Proteasome, subunit alpha/betaFamily
E [auth e],
S [auth E]		IPR033812Proteasome subunit alpha5Family
E [auth e],
S [auth E]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
E [auth e],
S [auth E]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
E [auth e],
S [auth E]		IPR050115Proteasome subunit alphaFamily
E [auth e],
S [auth E]		IPR023332Proteasome alpha-type subunitFamily
E [auth e],
S [auth E]		IPR001353Proteasome, subunit alpha/betaFamily
D [auth d],
R [auth D]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
D [auth d],
R [auth D]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
D [auth d],
R [auth D]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
D [auth d],
R [auth D]		IPR050115Proteasome subunit alphaFamily
D [auth d],
R [auth D]		IPR023332Proteasome alpha-type subunitFamily
D [auth d],
R [auth D]		IPR001353Proteasome, subunit alpha/betaFamily
WA [auth 9]IPR019954Ubiquitin conserved siteConserved Site
WA [auth 9]IPR050158Ubiquitin and ubiquitin-likeFamily
WA [auth 9]IPR000626Ubiquitin-like domainDomain
WA [auth 9]IPR019956Ubiquitin domainDomain
WA [auth 9]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
VA [auth 8]IPR000626Ubiquitin-like domainDomain
VA [auth 8]IPR044635Ubiquitin carboxyl-terminal hydrolase 14-likeFamily
VA [auth 8]IPR028889Ubiquitin specific protease UPS, catalytic domainDomain
VA [auth 8]IPR018200Ubiquitin specific protease, conserved siteConserved Site
VA [auth 8]IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolaseDomain
VA [auth 8]IPR038765Papain-like cysteine peptidase superfamilyHomologous Superfamily
VA [auth 8]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
UA [auth J]IPR05022126S Proteasome Regulatory ATPaseFamily
UA [auth J]IPR041569AAA ATPase, AAA+ lid domainDomain
UA [auth J]IPR032501Proteasomal ATPase, second OB domainDomain
UA [auth J]IPR003960ATPase, AAA-type, conserved siteConserved Site
UA [auth J]IPR003593AAA+ ATPase domainDomain
UA [auth J]IPR003959ATPase, AAA-type, coreDomain
UA [auth J]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
UA [auth J]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
TA [auth M]IPR05022126S Proteasome Regulatory ATPaseFamily
TA [auth M]IPR041569AAA ATPase, AAA+ lid domainDomain
TA [auth M]IPR032501Proteasomal ATPase, second OB domainDomain
TA [auth M]IPR003960ATPase, AAA-type, conserved siteConserved Site
TA [auth M]IPR003593AAA+ ATPase domainDomain
TA [auth M]IPR003959ATPase, AAA-type, coreDomain
TA [auth M]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
TA [auth M]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
SA [auth L]IPR05022126S Proteasome Regulatory ATPaseFamily
SA [auth L]IPR041569AAA ATPase, AAA+ lid domainDomain
SA [auth L]IPR032501Proteasomal ATPase, second OB domainDomain
SA [auth L]IPR003960ATPase, AAA-type, conserved siteConserved Site
SA [auth L]IPR003593AAA+ ATPase domainDomain
SA [auth L]IPR003959ATPase, AAA-type, coreDomain
SA [auth L]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
SA [auth L]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
RA [auth K]IPR05022126S Proteasome Regulatory ATPaseFamily
RA [auth K]IPR032501Proteasomal ATPase, second OB domainDomain
RA [auth K]IPR003960ATPase, AAA-type, conserved siteConserved Site
RA [auth K]IPR003593AAA+ ATPase domainDomain
RA [auth K]IPR003959ATPase, AAA-type, coreDomain
RA [auth K]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
RA [auth K]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
C [auth c],
Q [auth C]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
C [auth c],
Q [auth C]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
C [auth c],
Q [auth C]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
C [auth c],
Q [auth C]		IPR050115Proteasome subunit alphaFamily
C [auth c],
Q [auth C]		IPR023332Proteasome alpha-type subunitFamily
C [auth c],
Q [auth C]		IPR001353Proteasome, subunit alpha/betaFamily
QA [auth I]IPR05022126S Proteasome Regulatory ATPaseFamily
QA [auth I]IPR041569AAA ATPase, AAA+ lid domainDomain
QA [auth I]IPR032501Proteasomal ATPase, second OB domainDomain
QA [auth I]IPR003960ATPase, AAA-type, conserved siteConserved Site
QA [auth I]IPR003593AAA+ ATPase domainDomain
QA [auth I]IPR003959ATPase, AAA-type, coreDomain
QA [auth I]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
QA [auth I]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
PA [auth H]IPR04872326S proteasome regulatory subunit 7-like, OB domainDomain
PA [auth H]IPR05022126S Proteasome Regulatory ATPaseFamily
PA [auth H]IPR041569AAA ATPase, AAA+ lid domainDomain
PA [auth H]IPR003960ATPase, AAA-type, conserved siteConserved Site
PA [auth H]IPR003593AAA+ ATPase domainDomain
PA [auth H]IPR003959ATPase, AAA-type, coreDomain
PA [auth H]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
PA [auth H]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
OA [auth O]IPR054179PSD13, N-terminalDomain
OA [auth O]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
OA [auth O]IPR03529826S Proteasome non-ATPase regulatory subunit 13Family
OA [auth O]IPR000717Proteasome component (PCI) domainDomain
OA [auth O]IPR040798Rpn9, C-terminal helixDomain
NA [auth U]IPR024969EIF3F/CSN6-like, C-terminalDomain
NA [auth U]IPR037518MPN domainDomain
NA [auth U]IPR03385826S Proteasome non-ATPase regulatory subunit 7/8Family
NA [auth U]IPR000555JAB1/MPN/MOV34 metalloenzyme domainDomain
MA [auth R]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
MA [auth R]IPR01958526S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1Family
MA [auth R]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
MA [auth R]IPR04954926S proteasome regulatory subunit RPN7/PSMD6, C-terminal helixDomain
MA [auth R]IPR000717Proteasome component (PCI) domainDomain
MA [auth R]IPR04513526S proteasome regulatory subunit Rpn7, N-terminalDomain
MA [auth R]IPR019734Tetratricopeptide repeatRepeat
LA [auth Q]IPR05087126S Proteasome and COP9 Signalosome ComponentsFamily
LA [auth Q]IPR0407806S proteasome subunit Rpn6, C-terminal helix domainDomain
LA [auth Q]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
LA [auth Q]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
LA [auth Q]IPR04077326S proteasome regulatory subunit Rpn6, N-terminalDomain
LA [auth Q]IPR000717Proteasome component (PCI) domainDomain
KA [auth P]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
KA [auth P]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
KA [auth P]IPR000717Proteasome component (PCI) domainDomain
KA [auth P]IPR04089626S proteasome regulatory subunit RPN5, C-terminal domainDomain
KA [auth P]IPR04013426S Proteasome non-ATPase regulatory subunit 12/COP9 signalosome complex subunit 4Family
KA [auth P]IPR054559PSMD12/CSN4-like, N-terminalDomain
JA [auth S]IPR000717Proteasome component (PCI) domainDomain
JA [auth S]IPR01358626S proteasome non-ATPase regulatory subunit 3, C-terminalDomain
JA [auth S]IPR05798526S proteasome non-ATPase regulatory subunit 3, N-terminal TPR repeatsDomain
JA [auth S]IPR050756COP9 signalosome complex subunit 3Family
JA [auth S]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
IA [auth N]IPR04062326S proteasome regulatory subunit RPN2, C-terminalDomain
IA [auth N]IPR016024Armadillo-type foldHomologous Superfamily
IA [auth N]IPR002015Proteasome/cyclosome repeatRepeat
IA [auth N]IPR011989Armadillo-like helicalHomologous Superfamily
IA [auth N]IPR04857026S proteasome non-ATPase regulatory subunit 1/RPN2, N-terminal domainDomain
IA [auth N]IPR01664226S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunitFamily
HA [auth Z]IPR04143326S proteasome non-ATPase regulatory subunit RPN1, C-terminalDomain
HA [auth Z]IPR016024Armadillo-type foldHomologous Superfamily
HA [auth Z]IPR002015Proteasome/cyclosome repeatRepeat
HA [auth Z]IPR01664326S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunitFamily
HA [auth Z]IPR011989Armadillo-like helicalHomologous Superfamily
HA [auth Z]IPR040892RPN1, N-terminalDomain
B [auth b],
P [auth B]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
B [auth b],
P [auth B]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
B [auth b],
P [auth B]		IPR050115Proteasome subunit alphaFamily
B [auth b],
P [auth B]		IPR023332Proteasome alpha-type subunitFamily
B [auth b],
P [auth B]		IPR001353Proteasome, subunit alpha/betaFamily
GA [auth Y]IPR007834DSS1/SEM1Family
FA [auth X]IPR044868Rpn13/ADRM1, Pru domainDomain
FA [auth X]IPR006773Proteasomal ubiquitin receptor Rpn13/ADRM1Family
FA [auth X]IPR038633Proteasomal ubiquitin receptor Rpn13/ADRM1, Pru domain superfamilyHomologous Superfamily
EA [auth T]IPR000717Proteasome component (PCI) domainDomain
EA [auth T]IPR00674626S proteasome non-ATPase regulatory subunit Rpn12Family
EA [auth T]IPR033464CSN8/PSMD8/EIF3KDomain
DA [auth V]IPR050242JAMM/MPN+ metalloenzymes, peptidase M67AFamily
DA [auth V]IPR037518MPN domainDomain
DA [auth V]IPR05626326S proteasome regulatory subunit RPN11, C-terminal domainDomain
DA [auth V]IPR000555JAB1/MPN/MOV34 metalloenzyme domainDomain
CA [auth W]IPR036465von Willebrand factor A-like domain superfamilyHomologous Superfamily
CA [auth W]IPR02704026S proteasome non-ATPase regulatory subunit 4Family
CA [auth W]IPR002035von Willebrand factor, type ADomain
CA [auth W]IPR003903Ubiquitin interacting motifConserved Site
BA [auth 7],
N [auth n]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
BA [auth 7],
N [auth n]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
BA [auth 7],
N [auth n]		IPR023333Proteasome B-type subunitFamily
BA [auth 7],
N [auth n]		IPR016295Proteasome subunit beta 4Family
BA [auth 7],
N [auth n]		IPR001353Proteasome, subunit alpha/betaFamily
AA [auth 6],
M [auth m]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
AA [auth 6],
M [auth m]		IPR023333Proteasome B-type subunitFamily
AA [auth 6],
M [auth m]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
AA [auth 6],
M [auth m]		IPR001353Proteasome, subunit alpha/betaFamily
L [auth l],
Z [auth 5]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
L [auth l],
Z [auth 5]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
L [auth l],
Z [auth 5]		IPR023333Proteasome B-type subunitFamily
L [auth l],
Z [auth 5]		IPR001353Proteasome, subunit alpha/betaFamily
L [auth l],
Z [auth 5]		IPR000243Peptidase T1A, proteasome beta-subunitFamily
K [auth k],
Y [auth 4]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
K [auth k],
Y [auth 4]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
K [auth k],
Y [auth 4]		IPR023333Proteasome B-type subunitFamily
K [auth k],
Y [auth 4]		IPR001353Proteasome, subunit alpha/betaFamily
K [auth k],
Y [auth 4]		IPR035206Proteasome subunit beta 2Family
J [auth j],
X [auth 3]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
J [auth j],
X [auth 3]		IPR023333Proteasome B-type subunitFamily
J [auth j],
X [auth 3]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
J [auth j],
X [auth 3]		IPR001353Proteasome, subunit alpha/betaFamily
J [auth j],
X [auth 3]		IPR033811Proteasome beta 3 subunitFamily
A [auth a],
O [auth A]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
A [auth a],
O [auth A]		IPR034642Proteasome subunit alpha6Family
A [auth a],
O [auth A]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
A [auth a],
O [auth A]		IPR050115Proteasome subunit alphaFamily
A [auth a],
O [auth A]		IPR023332Proteasome alpha-type subunitFamily
A [auth a],
O [auth A]		IPR001353Proteasome, subunit alpha/betaFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
WA [auth 9]Pharos:  P0CG47