Crystal Structure of VN01H1 Fab in complex with SARS-CoV-2 S fusion peptide
External Resource: Annotation
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
| B [auth H] | Beta-lactamase | e7skzH1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: Beta-lactamase | ECOD (v294.1) |
| C [auth L] | Beta-lactamase | e7skzL1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Cytochrome P450 | T: Cytochrome P450 | F: Beta-lactamase | ECOD (v294.1) |
| Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
|---|
| B [auth H] | Heavy Chain | IGHV3 | - | pro-ser-lys-arg-ser-phe-ile-glu-asp-leu-leu-phe-asn | SAbDab (2026-04-10) |
| C [auth L] | Light Chain | IGKV3 | Kappa | pro-ser-lys-arg-ser-phe-ile-glu-asp-leu-leu-phe-asn | SAbDab (2026-04-10) |
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|
| PRO-SER-LYS-ARG-SER-PHE-ILE-GLU-ASP-LEU-LEU-PHE-ASN | | | |
| B [auth H] | Heavy chain of VN01H1 Fab | - | - | - |
| C [auth L] | Light chain of VN01H1 Fab | - | - | - |
| Chains | Accession | Name | Type |
|---|
| IPR044873 | Spike glycoprotein S2, coronavirus, heptad repeat 1 | Domain |
| IPR044366 | Spike (S) protein S1 subunit, receptor-binding domain, SARS-CoV-2 | Domain |
| IPR018548 | Spike (S) protein S1 subunit, receptor-binding domain, betacoronavirus | Domain |
| IPR044341 | Spike (S) protein S1 subunit, N-terminal domain, SARS-CoV-like | Domain |
| IPR032500 | Spike glycoprotein S1, N-terminal domain, betacoronavirus-like | Domain |
| IPR042578 | Spike glycoprotein, betacoronavirus | Family |
| IPR036326 | Spike S1 subunit, receptor binding domain superfamily, betacoronavirus | Homologous Superfamily |
| IPR043002 | Spike glycoprotein, N-terminal domain superfamily | Homologous Superfamily |
| IPR044874 | Spike glycoprotein S2, coronavirus, heptad repeat 2 | Domain |
| IPR043473 | Spike glycoprotein S2 superfamily, coronavirus | Homologous Superfamily |
| IPR043607 | Coronavirus spike glycoprotein S1, C-terminal | Domain |
| IPR002552 | Spike glycoprotein S2, coronavirus | Domain |