8A18
1.63 A resolution hydroquinone inhibited Sporosarcina pasteurii urease
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth AAA] | SCOP2B Superfamily | Urease, gamma-subunit | 8034247 | 3001945 | SCOP2B (2022-06-29) |
B [auth BBB] | SCOP2B Superfamily | Urease, beta-subunit | 8043131 | 3001949 | SCOP2B (2022-06-29) |
C [auth CCC] | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8043172 | 3000176 | SCOP2B (2022-06-29) |
C [auth CCC] | SCOP2B Superfamily | Metallo-dependent hydrolases | 8043430 | 3000428 | SCOP2B (2022-06-29) |
C [auth CCC] | SCOP2B Superfamily | Metallo-dependent hydrolases | 8043430 | 3000428 | SCOP2B (2022-06-29) |
C [auth CCC] | SCOP2B Superfamily | Composite domain of metallo-dependent hydrolases | 8043172 | 3000176 | SCOP2B (2022-06-29) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth AAA] | PF00547 | Urease, gamma subunit (Urease_gamma) | Urease, gamma subunit | Urease is a nickel-binding enzyme that catalyses the hydrolysis of urea to carbon dioxide and ammonia. | Domain |
B [auth BBB] | PF00699 | Urease beta subunit (Urease_beta) | Urease beta subunit | This subunit is known as alpha in Heliobacter. | Domain |
C [auth CCC] | PF00449 | Urease alpha-subunit, N-terminal domain (Urease_alpha) | Urease alpha-subunit, N-terminal domain | The N-terminal domain is a composite domain and plays a major trimer stabilising role by contacting the catalytic domain of the symmetry related alpha-subunit. | Domain |
C [auth CCC] | PF01979 | Amidohydrolase family (Amidohydro_1) | Amidohydrolase family | This family of enzymes are a a large metal dependent hydrolase superfamily [1]. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisatio ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth AAA] | IPR050069 | Urease subunit | Family |
A [auth AAA] | IPR012010 | Urease, gamma subunit | Family |
A [auth AAA] | IPR002026 | Urease, gamma/gamma-beta subunit | Family |
A [auth AAA] | IPR036463 | Urease, gamma subunit superfamily | Homologous Superfamily |
B [auth BBB] | IPR002019 | Urease, beta subunit-like | Family |
B [auth BBB] | IPR050069 | Urease subunit | Family |
B [auth BBB] | IPR036461 | Urease, beta subunit superfamily | Homologous Superfamily |
C [auth CCC] | IPR029754 | Urease nickel binding site | Binding Site |
C [auth CCC] | IPR017950 | Urease active site | Active Site |
C [auth CCC] | IPR006680 | Amidohydrolase-related | Domain |
C [auth CCC] | IPR011059 | Metal-dependent hydrolase, composite domain superfamily | Homologous Superfamily |
C [auth CCC] | IPR032466 | Metal-dependent hydrolase | Homologous Superfamily |
C [auth CCC] | IPR011612 | Urease alpha-subunit, N-terminal domain | Domain |
C [auth CCC] | IPR050112 | Urease Alpha Subunit | Family |
C [auth CCC] | IPR005848 | Urease, alpha subunit | Family |
C [auth CCC] | IPR017951 | Urease alpha subunit, C-terminal | Domain |
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
A [auth AAA] | CXM | Parent Component: MET :  AA0363 , AA0493 :  N-carboxy-L-methionine MOD:00368 , N-(dihydroxymethyl)-L-methionine (fMet) MOD:01446 , N-(dihydroxymethyl)-L-methionine (Met) MOD:01447 |
C [auth CCC] | KCX | Parent Component: LYS :  AA0363 , AA0493 |