Cryo-EM structure of unprotonated LHCII nanodisc at low pH value
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A [auth N] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8041052 | 3000343 | SCOP2B (2022-06-29) |
| B [auth G] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8041052 | 3000343 | SCOP2B (2022-06-29) |
| C [auth Y] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8041052 | 3000343 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A [auth N] | e8ix2N1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Cullin_AB | F: | ECOD (20:10:01) | |
| B [auth G] | e8ix2G1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Cullin_AB | F: | ECOD (20:10:01) | |
| C [auth Y] | e8ix2Y1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Cullin_AB | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A [auth N] | 1.10.3460.10 | Mainly Alpha | Orthogonal Bundle | Chlorophyll a-b binding protein | Chlorophyll a/b binding protein domain | CATH (utative) |
| B [auth G] | 1.10.3460.10 | Mainly Alpha | Orthogonal Bundle | Chlorophyll a-b binding protein | Chlorophyll a/b binding protein domain | CATH (utative) |
| C [auth Y] | 1.10.3460.10 | Mainly Alpha | Orthogonal Bundle | Chlorophyll a-b binding protein | Chlorophyll a/b binding protein domain | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A [auth N], B [auth G], C [auth Y] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A [auth N], B [auth G], C [auth Y] | IPR001344 | Chlorophyll A-B binding protein, plant and chromista | Family |
| A [auth N], B [auth G], C [auth Y] | IPR022796 | Chlorophyll A-B binding protein | Family |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| PDBTM | Annotated as membrane protein by PDBTM |














