9CU4 | pdb_00009cu4

KSHV glycoprotein B ectodomain, postfusion form

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AGp138_Ne9cu4A01 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicaseT: Helical bundle in Hef helicaseF: Gp138_NECOD (develop294)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF00606Herpesvirus Glycoprotein B ectodomain (Glycoprotein_B)Herpesvirus Glycoprotein B ectodomainThis domain corresponds to the ectodomain of glycoprotein B according to ECOD. Domain
A, B, C
PF17417Herpesvirus Glycoprotein B PH-like domain (Glycoprot_B_PH2)Herpesvirus Glycoprotein B PH-like domainThis domain corresponds to the second PH-like domain in herpesvirus glycoprotein B. Domain
A, B, C
PF17416Herpesvirus Glycoprotein B (Glycoprot_B_PH1)Herpesvirus Glycoprotein BThis domain has a PH-like fold. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
ORF8-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR000234Herpesvirus Glycoprotein BFamily
A, B, C
IPR035381Herpesvirus Glycoprotein B, PH-like domain 2Domain
A, B, C
IPR035377Herpesvirus Glycoprotein B, PH-like domain 1Domain
A, B, C
IPR055341Herpesvirus glycoprotein B ectodomain C-terminalDomain
A, B, C
IPR038631Herpesvirus Glycoprotein B, PH-like domain 2 superfamilyHomologous Superfamily