9GO6 | pdb_00009go6

Salmonella hook-filament junction complex

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
Z [auth Q]	SCOP2B Superfamily	FlgL-like	8054356	3002287	SCOP2B (2022-06-29)
Y [auth P]	SCOP2B Superfamily	FlgL-like	8054356	3002287	SCOP2B (2022-06-29)
X [auth O]	SCOP2B Superfamily	FlgL-like	8054356	3002287	SCOP2B (2022-06-29)
W [auth N]	SCOP2B Superfamily	FlgL-like	8054356	3002287	SCOP2B (2022-06-29)
V [auth M]	SCOP2B Superfamily	FlgL-like	8054356	3002287	SCOP2B (2022-06-29)
U [auth L]	SCOP2B Superfamily	FlgL-like	8054356	3002287	SCOP2B (2022-06-29)
EA [auth V]	SCOP2B Superfamily	FlgL-like	8054356	3002287	SCOP2B (2022-06-29)
DA [auth U]	SCOP2B Superfamily	FlgL-like	8054356	3002287	SCOP2B (2022-06-29)
CA [auth T]	SCOP2B Superfamily	FlgL-like	8054356	3002287	SCOP2B (2022-06-29)
BA [auth S]	SCOP2B Superfamily	FlgL-like	8054356	3002287	SCOP2B (2022-06-29)
AA [auth R]	SCOP2B Superfamily	FlgL-like	8054356	3002287	SCOP2B (2022-06-29)
TA [auth o]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
TA [auth o]	SCOP2B Superfamily	FliC central-region like	8034125	3001385	SCOP2B (2022-06-29)
TA [auth o]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
SA [auth n]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
SA [auth n]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
SA [auth n]	SCOP2B Superfamily	FliC central-region like	8034125	3001385	SCOP2B (2022-06-29)
RA [auth m]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
RA [auth m]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
RA [auth m]	SCOP2B Superfamily	FliC central-region like	8034125	3001385	SCOP2B (2022-06-29)
QA [auth l]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
QA [auth l]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
QA [auth l]	SCOP2B Superfamily	FliC central-region like	8034125	3001385	SCOP2B (2022-06-29)
PA [auth k]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
PA [auth k]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
PA [auth k]	SCOP2B Superfamily	FliC central-region like	8034125	3001385	SCOP2B (2022-06-29)
OA [auth j]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
OA [auth j]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
OA [auth j]	SCOP2B Superfamily	FliC central-region like	8034125	3001385	SCOP2B (2022-06-29)
NA [auth i]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
NA [auth i]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
NA [auth i]	SCOP2B Superfamily	FliC central-region like	8034125	3001385	SCOP2B (2022-06-29)
MA [auth h]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
MA [auth h]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
MA [auth h]	SCOP2B Superfamily	FliC central-region like	8034125	3001385	SCOP2B (2022-06-29)
LA [auth g]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
LA [auth g]	SCOP2B Superfamily	FliC central-region like	8034125	3001385	SCOP2B (2022-06-29)
LA [auth g]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
KA [auth f]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
KA [auth f]	SCOP2B Superfamily	FliC central-region like	8034125	3001385	SCOP2B (2022-06-29)
KA [auth f]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
JA [auth e]	SCOP2B Superfamily	FliC central-region like	8034125	3001385	SCOP2B (2022-06-29)
JA [auth e]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
JA [auth e]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
IA [auth d]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
IA [auth d]	SCOP2B Superfamily	FliC central-region like	8034125	3001385	SCOP2B (2022-06-29)
IA [auth d]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
HA [auth c]	SCOP2B Superfamily	FliC central-region like	8034125	3001385	SCOP2B (2022-06-29)
HA [auth c]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
HA [auth c]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
GA [auth b]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
GA [auth b]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
GA [auth b]	SCOP2B Superfamily	FliC central-region like	8034125	3001385	SCOP2B (2022-06-29)
FA [auth a]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
FA [auth a]	SCOP2B Superfamily	FlgL-like	8054354	3002287	SCOP2B (2022-06-29)
FA [auth a]	SCOP2B Superfamily	FliC central-region like	8034125	3001385	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
J [auth A]	PsaL	e9go6A01	A: alpha bundles	X: Helical bundle insertion in helicase domains	H: Helical bundle in Hef helicase	T: Helical bundle in Hef helicase	F: PsaL	ECOD (develop294)
U [auth L]	PsaL	e9go6L01	A: alpha bundles	X: Helical bundle insertion in helicase domains	H: Helical bundle in Hef helicase	T: Helical bundle in Hef helicase	F: PsaL	ECOD (develop294)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], O [auth F], P [auth G], Q [auth H], R [auth I], S [auth J], T [auth K]	PF00700	Bacterial flagellin C-terminal helical region (Flagellin_C)	Bacterial flagellin C-terminal helical region	Flagellins polymerise to form bacterial flagella. There is some similarity between this entry and Pfam:PF00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate [2] and this is shown to be correct as structur ...	Flagellins polymerise to form bacterial flagella. There is some similarity between this entry and Pfam:PF00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate [2] and this is shown to be correct as structurally this domain forms an extended helix that interacts with the N-terminal region (Pfam:PF00669) to form the D0 and D1 structural domains [3]. These domains are responsible for the activation of TLR5, with the C-terminal D0 region playing a key role [4-6].	Domain
J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], O [auth F], P [auth G], Q [auth H], R [auth I], S [auth J], T [auth K]	PF08884	Flagellin D3 domain (Flagellin_D3)	Flagellin D3 domain	This domain is found in the central portion bacterial flagellin FliC. The domain contains a structural motif called a beta-folium fold [1]. Although no specific function is assigned to this domain its deletion leads to a reduction in filament stabi ...	This domain is found in the central portion bacterial flagellin FliC. The domain contains a structural motif called a beta-folium fold [1]. Although no specific function is assigned to this domain its deletion leads to a reduction in filament stability [2].	Domain
J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], O [auth F], P [auth G], Q [auth H], R [auth I], S [auth J], T [auth K]	PF00669	Bacterial flagellin N-terminal helical region (Flagellin_N)	Bacterial flagellin N-terminal helical region	-	Family
J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], O [auth F], P [auth G], Q [auth H], R [auth I], S [auth J], T [auth K]	PF21504	Flagellin, barrel domain (FLIC_barrel)	Flagellin, barrel domain	This entry represents a barrel domain of flagellins FliC and FljB, which have a boomerang-shape with one arm composed of domain D1 and the other formed by D2 and D3 [1-3]. This entry corresponds to to subdomain D2b described in [4].	Domain
AA [auth R], BA [auth S], CA [auth T], DA [auth U], EA [auth V], AA [auth R], BA [auth S], CA [auth T], DA [auth U], EA [auth V], U [auth L], V [auth M], W [auth N], X [auth O], Y [auth P], Z [auth Q]	PF08884	Flagellin D3 domain (Flagellin_D3)	Flagellin D3 domain	This domain is found in the central portion bacterial flagellin FliC. The domain contains a structural motif called a beta-folium fold [1]. Although no specific function is assigned to this domain its deletion leads to a reduction in filament stabi ...	This domain is found in the central portion bacterial flagellin FliC. The domain contains a structural motif called a beta-folium fold [1]. Although no specific function is assigned to this domain its deletion leads to a reduction in filament stability [2].	Domain
AA [auth R], BA [auth S], CA [auth T], DA [auth U], EA [auth V], AA [auth R], BA [auth S], CA [auth T], DA [auth U], EA [auth V], U [auth L], V [auth M], W [auth N], X [auth O], Y [auth P], Z [auth Q]	PF00669	Bacterial flagellin N-terminal helical region (Flagellin_N)	Bacterial flagellin N-terminal helical region	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth 1], B [auth 2], C [auth 3], D [auth 4], E [auth 5], A [auth 1], B [auth 2], C [auth 3], D [auth 4], E [auth 5], F [auth 6], G [auth 7], H [auth 8], I [auth 9], UA [auth w], VA [auth x], WA [auth y], XA [auth z]	Flagellar hook protein FlgE	-	bacterial-type flagellum-dependent swarming motility bacterial-type flagellum-dependent cell motility cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol bacterial-type flagellum basal body cell projection organelle membraneless organelle bacterial-type flagellum bacterial-type flagellum hook
J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], O [auth F], P [auth G], Q [auth H], R [auth I], S [auth J], T [auth K]	Flagellar hook-associated protein 1	structural molecule activity	organelle assembly cell projection organization bacterial-type flagellum assembly membraneless organelle assembly cellular component biogenesis cellular component organization bacterial-type flagellum organization organelle organization cellular component assembly cellular process cellular component organization or biogenesis cell projection assembly	cellular anatomical structure extracellular region cell projection bacterial-type flagellum hook organelle membraneless organelle bacterial-type flagellum
AA [auth R], BA [auth S], CA [auth T], DA [auth U], EA [auth V], AA [auth R], BA [auth S], CA [auth T], DA [auth U], EA [auth V], U [auth L], V [auth M], W [auth N], X [auth O], Y [auth P], Z [auth Q]	Flagellar hook-associated protein	structural molecule activity	bacterial-type flagellum-dependent cell motility cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility	cellular anatomical structure extracellular region cell projection bacterial-type flagellum hook organelle membraneless organelle bacterial-type flagellum
FA [auth a], GA [auth b], HA [auth c], IA [auth d], JA [auth e], FA [auth a], GA [auth b], HA [auth c], IA [auth d], JA [auth e], KA [auth f], LA [auth g], MA [auth h], NA [auth i], OA [auth j], PA [auth k], QA [auth l], RA [auth m], SA [auth n], TA [auth o]	Flagellin	structural molecule activity molecular function activator activity molecular function regulator activity signaling receptor regulator activity receptor ligand activity signaling receptor activator activity	bacterial-type flagellum-dependent cell motility cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility	cell projection cellular anatomical structure organelle membraneless organelle bacterial-type flagellum extracellular region extracellular space

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth 1], B [auth 2], C [auth 3], D [auth 4], E [auth 5], A [auth 1], B [auth 2], C [auth 3], D [auth 4], E [auth 5], F [auth 6], G [auth 7], H [auth 8], I [auth 9], UA [auth w], VA [auth x], WA [auth y], XA [auth z]	IPR011491	Flagellar hook protein FlgE, D2 domain	Domain
A [auth 1], B [auth 2], C [auth 3], D [auth 4], E [auth 5], A [auth 1], B [auth 2], C [auth 3], D [auth 4], E [auth 5], F [auth 6], G [auth 7], H [auth 8], I [auth 9], UA [auth w], VA [auth x], WA [auth y], XA [auth z]	IPR019776	Flagellar basal body rod protein, conserved site	Conserved Site
A [auth 1], B [auth 2], C [auth 3], D [auth 4], E [auth 5], A [auth 1], B [auth 2], C [auth 3], D [auth 4], E [auth 5], F [auth 6], G [auth 7], H [auth 8], I [auth 9], UA [auth w], VA [auth x], WA [auth y], XA [auth z]	IPR020013	Flagellar hook-basal body protein, FlgE/F/G	Family
A [auth 1], B [auth 2], C [auth 3], D [auth 4], E [auth 5], A [auth 1], B [auth 2], C [auth 3], D [auth 4], E [auth 5], F [auth 6], G [auth 7], H [auth 8], I [auth 9], UA [auth w], VA [auth x], WA [auth y], XA [auth z]	IPR010930	Flagellar basal-body/hook protein, C-terminal domain	Domain
A [auth 1], B [auth 2], C [auth 3], D [auth 4], E [auth 5], A [auth 1], B [auth 2], C [auth 3], D [auth 4], E [auth 5], F [auth 6], G [auth 7], H [auth 8], I [auth 9], UA [auth w], VA [auth x], WA [auth y], XA [auth z]	IPR053967	Flagellar hook protein FlgE/F/G-like, D1 domain	Domain
A [auth 1], B [auth 2], C [auth 3], D [auth 4], E [auth 5], A [auth 1], B [auth 2], C [auth 3], D [auth 4], E [auth 5], F [auth 6], G [auth 7], H [auth 8], I [auth 9], UA [auth w], VA [auth x], WA [auth y], XA [auth z]	IPR037058	Flagellar hook protein FlgE superfamily	Homologous Superfamily
A [auth 1], B [auth 2], C [auth 3], D [auth 4], E [auth 5], A [auth 1], B [auth 2], C [auth 3], D [auth 4], E [auth 5], F [auth 6], G [auth 7], H [auth 8], I [auth 9], UA [auth w], VA [auth x], WA [auth y], XA [auth z]	IPR001444	Flagellar basal body rod protein, N-terminal	Domain
A [auth 1], B [auth 2], C [auth 3], D [auth 4], E [auth 5], A [auth 1], B [auth 2], C [auth 3], D [auth 4], E [auth 5], F [auth 6], G [auth 7], H [auth 8], I [auth 9], UA [auth w], VA [auth x], WA [auth y], XA [auth z]	IPR037925	Flagellar hook-basal body protein, FlgE/F/G-like	Homologous Superfamily
J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], O [auth F], P [auth G], Q [auth H], R [auth I], S [auth J], T [auth K]	IPR049119	Flagellar hook-associated protein 1, D2-like domain	Domain
J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], O [auth F], P [auth G], Q [auth H], R [auth I], S [auth J], T [auth K]	IPR019776	Flagellar basal body rod protein, conserved site	Conserved Site
J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], O [auth F], P [auth G], Q [auth H], R [auth I], S [auth J], T [auth K]	IPR002371	Flagellar hook-associated protein 1	Family
J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], O [auth F], P [auth G], Q [auth H], R [auth I], S [auth J], T [auth K]	IPR053927	Flagellar hook-associated protein FlgK, helical domain	Domain
J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], O [auth F], P [auth G], Q [auth H], R [auth I], S [auth J], T [auth K]	IPR010930	Flagellar basal-body/hook protein, C-terminal domain	Domain
J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], O [auth F], P [auth G], Q [auth H], R [auth I], S [auth J], T [auth K]	IPR001444	Flagellar basal body rod protein, N-terminal	Domain
AA [auth R], BA [auth S], CA [auth T], DA [auth U], EA [auth V], AA [auth R], BA [auth S], CA [auth T], DA [auth U], EA [auth V], U [auth L], V [auth M], W [auth N], X [auth O], Y [auth P], Z [auth Q]	IPR013384	Flagellar hook-associated protein 3	Family
AA [auth R], BA [auth S], CA [auth T], DA [auth U], EA [auth V], AA [auth R], BA [auth S], CA [auth T], DA [auth U], EA [auth V], U [auth L], V [auth M], W [auth N], X [auth O], Y [auth P], Z [auth Q]	IPR001029	Flagellin, N-terminal domain	Domain
AA [auth R], BA [auth S], CA [auth T], DA [auth U], EA [auth V], AA [auth R], BA [auth S], CA [auth T], DA [auth U], EA [auth V], U [auth L], V [auth M], W [auth N], X [auth O], Y [auth P], Z [auth Q]	IPR001492	Flagellin	Family
FA [auth a], GA [auth b], HA [auth c], IA [auth d], JA [auth e], FA [auth a], GA [auth b], HA [auth c], IA [auth d], JA [auth e], KA [auth f], LA [auth g], MA [auth h], NA [auth i], OA [auth j], PA [auth k], QA [auth l], RA [auth m], SA [auth n], TA [auth o]	IPR049365	Flagellin, barrel domain	Domain
FA [auth a], GA [auth b], HA [auth c], IA [auth d], JA [auth e], FA [auth a], GA [auth b], HA [auth c], IA [auth d], JA [auth e], KA [auth f], LA [auth g], MA [auth h], NA [auth i], OA [auth j], PA [auth k], QA [auth l], RA [auth m], SA [auth n], TA [auth o]	IPR046358	Flagellin, C-terminal domain	Domain
FA [auth a], GA [auth b], HA [auth c], IA [auth d], JA [auth e], FA [auth a], GA [auth b], HA [auth c], IA [auth d], JA [auth e], KA [auth f], LA [auth g], MA [auth h], NA [auth i], OA [auth j], PA [auth k], QA [auth l], RA [auth m], SA [auth n], TA [auth o]	IPR014981	Flagellin D3	Domain
FA [auth a], GA [auth b], HA [auth c], IA [auth d], JA [auth e], FA [auth a], GA [auth b], HA [auth c], IA [auth d], JA [auth e], KA [auth f], LA [auth g], MA [auth h], NA [auth i], OA [auth j], PA [auth k], QA [auth l], RA [auth m], SA [auth n], TA [auth o]	IPR001029	Flagellin, N-terminal domain	Domain
FA [auth a], GA [auth b], HA [auth c], IA [auth d], JA [auth e], FA [auth a], GA [auth b], HA [auth c], IA [auth d], JA [auth e], KA [auth f], LA [auth g], MA [auth h], NA [auth i], OA [auth j], PA [auth k], QA [auth l], RA [auth m], SA [auth n], TA [auth o]	IPR042187	Flagellin, C-terminal domain, subdomain 2	Homologous Superfamily
FA [auth a], GA [auth b], HA [auth c], IA [auth d], JA [auth e], FA [auth a], GA [auth b], HA [auth c], IA [auth d], JA [auth e], KA [auth f], LA [auth g], MA [auth h], NA [auth i], OA [auth j], PA [auth k], QA [auth l], RA [auth m], SA [auth n], TA [auth o]	IPR001492	Flagellin	Family