1CFY
YEAST COFILIN, MONOCLINIC CRYSTAL FORM
X-RAY DIFFRACTION
Starting Model(s)
Initial Refinement Model(s) | |||
---|---|---|---|
Type | Source | Accession Code | Details |
experimental model | PDB | 1COF |
Crystallization
Crystalization Experiments | ||||
---|---|---|---|---|
ID | Method | pH | Temperature | Details |
1 | 7.2 | CRYSTALLIZED FROM 30% PEG 4000 SOLUTION., pH 7.2 |
Crystal Properties | |
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Matthews coefficient | Solvent content |
2.82 | 57 |
Crystal Data
Unit Cell | |
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Length ( Å ) | Angle ( ˚ ) |
a = 152.089 | α = 90 |
b = 30.767 | β = 133.15 |
c = 105.94 | γ = 90 |
Symmetry | |
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Space Group | C 1 2 1 |
Diffraction
Diffraction Experiment | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID # | Crystal ID | Scattering Type | Data Collection Temperature | Detector | Detector Type | Details | Collection Date | Monochromator | Protocol | |||||
1 | 1 | x-ray | 290 | AREA DETECTOR | SIEMENS | 1995-02-21 | M |
Radiation Source | |||||
---|---|---|---|---|---|
ID # | Source | Type | Wavelength List | Synchrotron Site | Beamline |
1 | ROTATING ANODE | RIGAKU RUH2R |
Data Collection
Overall | |||||||||||||||||||
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ID # | Resolution (High) | Resolution (Low) | Percent Possible (Observed) | R Merge I (Observed) | Net I Over Average Sigma (I) | Redundancy | Number Reflections (All) | Number Reflections (Observed) | Observed Criterion Sigma (F) | Observed Criterion Sigma (I) | B (Isotropic) From Wilson Plot | ||||||||
1 | 2.3 | 21.6 | 82.8 | 0.051 | 19.8 | 1.7 | 13627 | 2 |
Refinement
Statistics | |||||||||||||||||||
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Diffraction ID | Structure Solution Method | Starting model | Resolution (High) | Resolution (Low) | Cut-off Sigma (F) | Number Reflections (Observed) | Number Reflections (R-Free) | Percent Reflections (Observed) | R-Work (Depositor) | R-Free (Depositor) | Mean Isotropic B | ||||||||
X-RAY DIFFRACTION | MOLECULAR REPLACEMENT | 1COF | 2.3 | 8 | 2 | 12501 | 78.1 | 0.175 | 30.5 |
RMS Deviations | |
---|---|
Key | Refinement Restraint Deviation |
p_staggered_tor | 16.8 |
p_transverse_tor | 14.5 |
p_scangle_it | 8.726 |
p_scbond_it | 5.797 |
p_mcangle_it | 5.174 |
p_mcbond_it | 3.298 |
p_planar_tor | 1.3 |
p_multtor_nbd | 0.189 |
p_singtor_nbd | 0.18 |
p_xyhbond_nbd | 0.174 |
Non-Hydrogen Atoms Used in Refinement | |
---|---|
Non-Hydrogen Atoms | Number |
Protein Atoms | 2114 |
Nucleic Acid Atoms | |
Solvent Atoms | 56 |
Heterogen Atoms |
Software
Software | |
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Software Name | Purpose |
X-PLOR | model building |
PROFFT | refinement |
X-PLOR | refinement |
XDS | data reduction |
XSCALE | data scaling |
X-PLOR | phasing |