1CKZ
CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE REGULATOR: SOLUTION STRUCTURES OF PEPTIDES BASED ON THE PHE508 REGION, THE MOST COMMON SITE OF DISEASE-CAUSING DELTA-F508 MUTATION
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | NOESY | 90% WATER / 10% DMSO-D6 | 4.0 | 1 atm | 298 | |||
2 | COSY | 90% WATER / 10% DMSO-D6 | 4.0 | 1 atm | 298 | |||
3 | TOCSY | 90% WATER / 10% DMSO-D6 | 4.0 | 1 atm | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | UNITYPLUS | 600 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry | X-PLOR |
NMR Ensemble Information | |
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Conformer Selection Criteria | LEAST RESTRAINTS VIOLATIONS AND LOW ENERGY |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 13 |
Representative Model | 1 (n/a) |
Additional NMR Experimental Information | |
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Details | THE SOLUTION STRUCTURES OF THE PEPTIDE (P25) BASED ON THE PHE508 REGION OF CFTR WAS DETERMINED BY HOMONUCLEAR 1H NMR SPECTROSCOPY PERFORMED AT 600 MHZ. THE PEPTIDE WAS SYNTHETICALLY MADE AND WAS UNLABELED. 2D 1H NOESY SPECTRUM USING 100,200 AND 300 MIXING TIMES, 2D TOCSY AT 65 MS AND 2D COSY SPECTRA WERE COLLECTED WITH THE PEPTIDE IN 90%H2O/10%DMSO-D6. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | X-PLOR | 3.8 | BRUNGER |
2 | structure solution | NMRVIEW2.1 |