1EXE
SOLUTION STRUCTURE OF A MUTANT OF TRANSCRIPTION FACTOR 1.
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 2 mM TF1-G15/I32, 100 mM phosphate buffer | 90% H2O/10% D2O | 400 mM NaCl | 6.7 | Ambient | 308 | |
2 | DQF-COSY | 2 mM TF1-G15/I32, 100 mM phosphate buffer | 90% H2O/10% D2O | 400 mM NaCl | 6.7 | Ambient | 308 | |
3 | 3D_15N-separated_NOESY | 2 mM TF1-G15/I32, U-15N, 100 mM phosphate buffer | 90% H2O/10% D2O | 400 mM NaCl | 6.7 | Ambient | 308 | |
4 | 3D_13C-separated_NOESY | 2 mM TF1-G15/I32, U-15N, 13C, 100 mM Phosphate buffer | 90% H2O/10% D2O | 400 mM NaCl | 6.7 | Ambient | 308 | |
5 | HNCA-J | 2 mM TF1-G15/I32, U-15N, 13C, 100 mM Phosphate buffer | 90% H2O/10% D2O | 400 mM NaCl | 6.7 | Ambient | 308 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AMX | 500 |
2 | Bruker | DRX | 600 |
NMR Refinement | ||
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Method | Details | Software |
Distance geometry, simulated annealing, molecular dynamics | The structures were based on a total of 2008 NOE-derived distance constraints, 288 dihedral angle restraints and 116 H-bond constraints. | XwinNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with acceptable covalent geometry,structures with the least restraint violations,structures with the lowest energy |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 23 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | XwinNMR | 1.3 | Bruker |
2 | processing | Felix | 97 | MSI |
3 | data analysis | Felix | 97 | MSI |
4 | structure solution | X-PLOR | 3 | Brunger |
5 | refinement | X-PLOR | 3 | Brunger |