1EXY
SOLUTION STRUCTURE OF HTLV-1 PEPTIDE BOUND TO ITS RNA APTAMER TARGET
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 1.2-2.8 mM of the complex, 10mM sodium phosphate, 0.2 mM EDTA | H2O, D2O | 10 mM | 6.4 | 1 atm | 298 | |
2 | reviewed in the primary citation | 1.2-2.8 mM of the complex, 10mM sodium phosphate, 0.2 mM EDTA | H2O, D2O | 10 mM | 6.4 | 1 atm | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 600 |
2 | Varian | INOVA | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing with torsion angle dynamics | X-PLOR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 60 |
Conformers Submitted Total Number | 12 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | X-PLOR | 3.8 | Brunger, A.T. |
2 | refinement | X-PLOR | 3.8 | Brunger, A.T. |