1FRY
THE SOLUTION STRUCTURE OF SHEEP MYELOID ANTIMICROBIAL PEPTIDE, RESIDUES 1-29 (SMAP29)
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 1mM smap29; 50mM phosphate buffer, pH 5.94 | 60% H2O, 40% D3-trifluoroethanol | ca. 50mM | 5.94 | 1 atm | 298 | |
2 | DQF-COSY | 1mM smap29; 50mM phosphate buffer, pH 5.94 | 60% H2O, 40% D3-trifluoroethanol | ca. 50mM | 5.94 | 1 atm | 298 | |
3 | tocsy | 1mM smap29; 50mM phosphate buffer, pH 5.94 | 60% H2O, 40% D3-trifluoroethanol | ca. 50mM | 5.94 | 1 atm | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | UNITY | 500 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics | Structure based on 217 noe contstraints and 8 HA-NH coupling constants | DYANA |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with acceptable covalent geometry, structures with the least restraint violations,structures with the lowest energy |
Conformers Calculated Total Number | 300 |
Conformers Submitted Total Number | 40 |
Representative Model | 1,21 (lowest energy) |
Additional NMR Experimental Information | |
---|---|
Details | This structure was determined using standard 2D homonuclear techniques. |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | DYANA | 1.5 | |
2 | collection | VNMR | 4.3b | |
3 | data analysis | VNMR | 6.1b | |
4 | refinement | VNMR | 6.1b |