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CRYSTAL STRUCTURE OF BOVINE RHODOPSIN
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6 MES, 2-MERCAPTOETHANOL, ZINC ACETATE, HEPTANETRIOL, NONYL-GLUCOSIDE, AMMONIUM SULFATE ARE IN THE HANGING DROPS. MERCURY ACETATE, pH 6.00
Crystal Properties Matthews coefficient Solvent content 4.1 70
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 97.246 α = 90 b = 97.246 β = 90 c = 149.544 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD 1999-12-12 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.8 30 97 0.121 9.5 3.35 33221 1.2 37.3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.8 2.9 80.7 0.69 1.17 2.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.8 30 2 44062 2026 69.8 0.175 0.212 RANDOM 45.3
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 6.7 6.7 -13.4
RMS Deviations Key Refinement Restraint Deviation o_dihedral_angle_d 20.1 o_scangle_it 2.51 o_mcangle_it 2.13 o_scbond_it 1.53 o_angle_deg 1.47 o_mcbond_it 1.2 o_improper_angle_d 0.85 o_bond_d 0.01 o_bond_d_na o_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation o_dihedral_angle_d 20.1 o_scangle_it 2.51 o_mcangle_it 2.13 o_scbond_it 1.53 o_angle_deg 1.47 o_mcbond_it 1.2 o_improper_angle_d 0.85 o_bond_d 0.01 o_bond_d_na o_bond_d_prot o_angle_d o_angle_d_na o_angle_d_prot o_angle_deg_na o_angle_deg_prot o_dihedral_angle_d_na o_dihedral_angle_d_prot o_improper_angle_d_na o_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5083 Nucleic Acid Atoms Solvent Atoms 12 Heterogen Atoms 456
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SHARP phasing