2AKK
Solution structure of phnA-like protein rp4479 from Rhodopseudomonas palustris
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N-separated_NOESY | 1mM rp4479, U-15N,13C: 450 mM NaCl, 25 mM Na2PO4, 1mM Benzamidine, 1xinhibitor cooktail, 0.01% NAN3, 95% H2O, 5% D2O | 95% H2O/5% D2O | 450 mM NaCl, 25 mM Phosphate buffer | 6.5 | ambinet | 298 | |
2 | 3D_13C-separated_NOESY | 1mM rp4479, U-15N,13C: 450 mM NaCl, 25 mM Na2PO4, 1mM Benzamidine, 1xinhibitor cooktail, 0.01% NAN3, 95% H2O, 5% D2O | 95% H2O/5% D2O | 450 mM NaCl, 25 mM Phosphate buffer | 6.5 | ambinet | 298 | |
3 | 4D_13C-separated_NOESY | 1mM rp4479, U-15N,13C: 450 mM NaCl, 25 mM Na2PO4, 1mM Benzamidine, 1xinhibitor cooktail, 0.01% NAN3, 95% H2O, 5% D2O | 95% H2O/5% D2O | 450 mM NaCl, 25 mM Phosphate buffer | 6.5 | ambinet | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 600 |
2 | Varian | INOVA | 800 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | 1500 NOE-derived distance restraints and 75 torsion angle restraints | NMRPipe |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | 2.3 | Delaglio, F. |
2 | structure solution | CYANA | 2.1 | Gunter, P. |
3 | refinement | CNS | 1.0 | Brunger, A.T. et al |