X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
17.520% PEG 3350, 2.5 MM ZINC ACETATE, MECAM, 10 MM TRIS, 75 MM NACL, pH 7.50
Crystal Properties
Matthews coefficientSolvent content
2.7254.4

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 73.072α = 91.29
b = 42.445β = 97.06
c = 57.523γ = 107.34
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray1002005-11-05MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID23-2ESRFID23-2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1269.1291.70.0813.23.6234253
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.42.5391.20.343.73.7

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.469.1722237118791.70.1740.170.246RANDOM52.49
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.310.232.361.870.62-0.81
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg41.59
r_dihedral_angle_4_deg18.511
r_dihedral_angle_3_deg17.493
r_dihedral_angle_1_deg6.914
r_scangle_it2.69
r_scbond_it1.746
r_angle_refined_deg1.693
r_mcangle_it1.138
r_angle_other_deg0.921
r_mcbond_it0.69
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg41.59
r_dihedral_angle_4_deg18.511
r_dihedral_angle_3_deg17.493
r_dihedral_angle_1_deg6.914
r_scangle_it2.69
r_scbond_it1.746
r_angle_refined_deg1.693
r_mcangle_it1.138
r_angle_other_deg0.921
r_mcbond_it0.69
r_nbd_refined0.211
r_symmetry_vdw_refined0.206
r_nbd_other0.184
r_nbtor_refined0.178
r_xyhbond_nbd_refined0.172
r_symmetry_vdw_other0.128
r_chiral_restr0.091
r_nbtor_other0.089
r_symmetry_hbond_refined0.075
r_bond_refined_d0.019
r_gen_planes_refined0.006
r_gen_planes_other0.002
r_bond_other_d0.001
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4344
Nucleic Acid Atoms
Solvent Atoms75
Heterogen Atoms88

Software

Software
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling
MOLREPphasing