2DSM
NMR Structure of Bacillus Subtilis Protein YqaI, Northeast Structural Genomics Target SR450
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 3D_15N-separated_NOESY | 1.0mM YqaI, U-15N, 13C; 20mM MES, 100mM NaCl, 5mM CaCl2, 10mM DTT, 0.02% NaN3 | 95% D2O, 5% D2O | 100mM NaCl | 6.5 | ambient | 298 | |
| 2 | 3D_13C-separated_NOESY | 1.0mM YqaI, U-15N, 13C; 20mM MES, 100mM NaCl, 5mM CaCl2, 10mM DTT, 0.02% NaN3 | 95% D2O, 5% D2O | 100mM NaCl | 6.5 | ambient | 298 | |
| 3 | 3D_13C-separated_NOESY | 1.0mM YqaI, U-15N, 13C; 20mM MES, 100mM NaCl, 5mM CaCl2, 10mM DTT, 0.02% NaN3 | 100% D2O | 100mM NaCl | 6.5 | ambient | 298 | |
| 4 | 4D_13C/15N-separated_NOESY | 1.0mM YqaI, U-15N, 13C; 20mM MES, 100mM NaCl, 5mM CaCl2, 10mM DTT, 0.02% NaN3 | 100% D2O | 100mM NaCl | 6.5 | ambient | 298 | |
| 5 | HNHA | 1.4mM YqaI, U-15N, 5%-13C, 20mM MES, 100mM NaCl, 5mM CaCl2, 10mM DTT, 0.02% NaN3 | 95% D2O, 5% D2O | 100mM NaCl | 6.5 | ambient | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | INOVA | 600 |
| 2 | Varian | INOVA | 750 |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | all calculated structures submitted |
| Conformers Calculated Total Number | 20 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (closest to the average) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | data analysis | Sparky | 3.1 | |
| 2 | processing | NMRPipe | Linux9 | |
| 3 | refinement | X-PLOR | xplor-nih-2.11.2 | |
| 4 | refinement | CNS | 1.1 | |
| 5 | collection | VNMR | 6.1C | |
| 6 | data analysis | AutoStructure | 2.1.1 | |
