☰ Navigation Tabs
Anomalous substructure of Concanavalin A
Crystallization Crystal Properties Matthews coefficient Solvent content 2.29 46.24
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 61.64 α = 90 b = 86.05 β = 90 c = 88.45 γ = 90
Symmetry Space Group I 2 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2005-01-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X12 2.00 EMBL/DESY, HAMBURG X12
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 30 9510
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 2.4 30 9332 178 99.93 0.19294 0.19169 0.1963 0.25983 RANDOM 36.369
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 5.22 -0.84 -4.39
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.883 r_dihedral_angle_4_deg 23.571 r_dihedral_angle_3_deg 16.01 r_dihedral_angle_1_deg 8.462 r_scangle_it 5.311 r_scbond_it 3.51 r_angle_refined_deg 1.575 r_mcangle_it 1.417 r_angle_other_deg 1.008 r_mcbond_it 0.694
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.883 r_dihedral_angle_4_deg 23.571 r_dihedral_angle_3_deg 16.01 r_dihedral_angle_1_deg 8.462 r_scangle_it 5.311 r_scbond_it 3.51 r_angle_refined_deg 1.575 r_mcangle_it 1.417 r_angle_other_deg 1.008 r_mcbond_it 0.694 r_symmetry_hbond_refined 0.292 r_nbd_other 0.198 r_symmetry_vdw_other 0.194 r_nbd_refined 0.185 r_symmetry_vdw_refined 0.17 r_nbtor_refined 0.163 r_metal_ion_refined 0.146 r_xyhbond_nbd_refined 0.142 r_mcbond_other 0.111 r_chiral_restr 0.105 r_nbtor_other 0.085 r_bond_refined_d 0.018 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1809 Nucleic Acid Atoms Solvent Atoms 26 Heterogen Atoms 6
Software Software Software Name Purpose REFMAC refinement DENZO data reduction CCP4 data scaling FFT phasing