2KO2
NOGO66
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 0.5-1.0 mM NOGO-B | 90% H2O/10% D2O | 0.0 | 4.0 | AMBIENT | 308 | |
2 | 2D DQF-COSY | 0.5-1.0 mM NOGO-B | 90% H2O/10% D2O | 0.0 | 4.0 | AMBIENT | 308 | |
3 | 2D 1H-1H NOESY | 0.5-1.0 mM NOGO-B | 90% H2O/10% D2O | 0.0 | 4.0 | AMBIENT | 308 | |
4 | 2D 1H-1H TOCSY | 0.5-1.0 mM NOGO-B | 90% H2O/10% D2O | 0.0 | 4.0 | AMBIENT | 308 | |
5 | 3D 1H-15N NOESY | 0.5-1.0 mM NOGO-B | 90% H2O/10% D2O | 0.0 | 4.0 | AMBIENT | 308 | |
6 | 3D 1H-13C NOESY | 0.5-1.0 mM NOGO-B | 90% H2O/10% D2O | 0.0 | 4.0 | AMBIENT | 308 | |
7 | 3D HCCH-TOCSY | 0.5-1.0 mM NOGO-B | 90% H2O/10% D2O | 0.0 | 4.0 | AMBIENT | 308 | |
8 | 3D HNCACB | 0.5-1.0 mM NOGO-B | 90% H2O/10% D2O | 0.0 | 4.0 | AMBIENT | 308 | |
9 | 3D HN(CO)CA | 0.5-1.0 mM NOGO-B | 90% H2O/10% D2O | 0.0 | 4.0 | AMBIENT | 308 | |
10 | 3D HNCO | 0.5-1.0 mM NOGO-B | 90% H2O/10% D2O | 0.0 | 4.0 | AMBIENT | 308 | |
11 | 3D HNHA | 0.5-1.0 mM NOGO-B | 90% H2O/10% D2O | 0.0 | 4.0 | AMBIENT | 308 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | XPLOR-NIH WAS USED FOR REFINING THE FOLDED PROTEINS. DIHERAL ANGLE RESTRAINTS AND PRE RESTRAINTS WERE ADDED DURING REFINEMENT. | X-PLOR NIH |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 20 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | X-PLOR NIH | 2.20 | Schwieters, Kuszewski, Tjandra and Clore |
2 | chemical shift assignment | ANALYSIS | 1.0.15 | CCPN |
3 | data analysis | NMRDraw | 2.2 | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax |
4 | refinement | X-PLOR NIH | 2.20 | Schwieters, Kuszewski, Tjandra and Clore |